RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ST14Q9Y5Y6 855 aa11.39□□□□□ -0.59
CLSTN3-201ENST00000266546 FUOMA2VDF0 154 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 MTMR11A4FU01 709 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 HNRNPCL2B2RXH8 293 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SCAMP3O14828 347 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 WEE1P30291 646 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 PWP1Q13610 501 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SPDYE7PQ495Y7 208 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SCAMP5Q8TAC9 235 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 FEM1CQ96JP0 617 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SPATA17Q96L03 361 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 OR52E6Q96RD3 313 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 C20orf27Q9GZN8 174 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 KAT8Q9H7Z6 458 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 RPS6KA6Q9UK32 745 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 MYO18AQ92614 2054 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 F8W810 466 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CCL22O00626 93 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SDHDO14521 159 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 INPPL1O15357 1258 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 LBX1P52954 281 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 TUBA3CQ13748 450 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CES5AQ6NT32 575 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 ANKRD33Q7Z3H0 272 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 GATAD2AQ86YP4 633 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 PLD4Q96BZ4 506 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SEMA3CQ99985 751 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 TDRD1Q9BXT4 1180 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 RETREG1Q9H6L5 497 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 ELOVL7A1L3X0 281 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 TLL1O43897 1013 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CXCL14O95715 111 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 ITGALP20701 1170 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 IMPDH1P20839 514 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 MAPKAPK2P49137 400 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 TMBIM6P55061 237 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 GK3PQ14409 553 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 TSNQ15631 228 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 AHSA2Q719I0 299 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 GPR180Q86V85 440 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SLC44A2Q8IWA5 706 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 NAT16Q8N8M0 369 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 C3orf58Q8NDZ4 430 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 OLIG1Q8TAK6 271 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 POP5Q969H6 163 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 KLHL5Q96PQ7 755 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 LRRC3Q9BY71 257 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CERS4Q9HA82 394 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 FBRSL1Q9HCM7 1045 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SMOXQ9NWM0 555 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 INSL6Q9Y581 213 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CEPT1Q9Y6K0 416 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CCDC182A6NF36 153 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 MGAT4DA6NG13 374 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 PSMD11O00231 422 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 VILLO15195 856 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 AIREO43918 545 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 NBNO60934 754 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 EPN2O95208 641 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CES1P23141 567 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 CTNNB1P35222 781 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 DNASE1L3Q13609 305 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 AP5B1Q2VPB7 878 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 PARP15Q460N3 678 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 RAB41Q5JT25 222 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 KIAA0930Q6ICG6 404 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 RETSATQ6NUM9 610 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 NAPRTQ6XQN6 538 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 TRUB1Q8WWH5 349 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 ZUFSPQ96AP4 578 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 OTUB1Q96FW1 271 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SLC45A3Q96JT2 553 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 GAS2L1Q99501 681 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 SORT1Q99523 831 aa11.38□□□□□ -0.59
CLSTN3-201ENST00000266546 E9PAM4 449 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 ABCB7O75027 752 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 BEST1O76090 585 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 IFNA14P01570 189 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 FPGSQ05932 587 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 TP53BP2Q13625 1128 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 TYW3Q6IPR3 259 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 KLHL17Q6TDP4 642 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 RTL3Q8N8U3 475 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 OR4L1Q8NH43 312 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 ZNF461Q8TAF7 563 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SOX17Q9H6I2 414 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 ATP13A1Q9HD20 1204 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 PAK6Q9NQU5 681 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 CCM2LQ9NUG4 571 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 ENOPH1Q9UHY7 261 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 VPS28Q9UK41 221 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 TRAV19A0A0A6YYK7 116 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 PRR23D1E9PI22 279 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 OTCP00480 354 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 PRR23D2P0DMB1 279 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 ZNF7P17097 686 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 CD97P48960 835 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 EEFSECP57772 596 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 MTPNP58546 118 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 NIPAL4Q0D2K0 466 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms