RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TAS2R1Q9NYW7 299 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 MARK1Q9P0L2 795 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 TMCO1Q9UM00 188 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 SLC12A4Q9UP95 1085 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 EIF3LQ9Y262 564 aaKnown RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 PIAS3Q9Y6X2 628 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 IGLON5A6NGN9 336 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 EPOPA6NHQ4 379 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 PPP6CO00743 305 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 KLF8O95600 359 aaPredicted RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 C1SP09871 688 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 MAGEA12P43365 314 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 DNAJB13P59910 316 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 CNTN1Q12860 1018 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 UNC50Q53HI1 259 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 ZNF776Q68DI1 518 aaPredicted RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 SYCE2Q6PIF2 218 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 EPGNQ6UW88 154 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 ANGPTL8Q6UXH0 198 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 MBOAT1Q6ZNC8 495 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 MIER2Q8N344 545 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 HMGB4Q8WW32 186 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 RCN3Q96D15 328 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 NECTIN4Q96NY8 510 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 CDRT15Q96T59 188 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 KCNK13Q9HB14 408 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 PHPT1Q9NRX4 125 aaPredicted RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 SARDHQ9UL12 918 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 DYRK1BQ9Y463 629 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 FRMPD3Q5JV73 1810 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 ATXN2Q99700 1313 aaKnown RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 H7C0S8 307 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 ESRRBO95718 433 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 HNRNPH1P31943 449 aaKnown RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 PKNOX1P55347 436 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 RBBP5Q15291 538 aaKnown RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 CST6Q15828 149 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 CACHD1Q5VU97 1274 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 SULT1C3Q6IMI6 304 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 TRAM1L1Q8N609 369 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 BTN2A2Q8WVV5 523 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 TADA1Q96BN2 335 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 CLPTM1LQ96KA5 538 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 PARVBQ9HBI1 364 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 HEBP1Q9NRV9 189 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 GIMAP2Q9UG22 337 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 OAS3Q9Y6K5 1087 aaKnown RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 NLRC5Q86WI3 1866 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 PATJQ8NI35 1801 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 OTOL1A6NHN0 477 aaPredicted RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 A8MUI8 341 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 POP7O75817 140 aaKnown RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 BMP1P13497 986 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 HIST2H2ACQ16777 129 aaPredicted RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 XKR6Q5GH73 641 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 HIST2H2AA3Q6FI13 130 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 RINLQ6ZS11 566 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 GK5Q6ZS86 529 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 GALNT7Q86SF2 657 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 TREML1Q86YW5 311 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 SPDYE1Q8NFV5 336 aaPredicted RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 EID2BQ96D98 161 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 POLG2Q9UHN1 485 aa9.16□□□□□ -0.94
SSR3-201ENST00000265044 CFAP20Q9Y6A4 193 aaKnown RBP9.16□□□□□ -0.94
SSR3-201ENST00000265044 TSC2P49815 1807 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 MRASO14807 208 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 GSC2O15499 205 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 ENTPD5O75356 428 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 SLC35G4P0C7Q5 338 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 RPL10P27635 214 aaKnown RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 RPL38P63173 70 aaKnown RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 SATB1Q01826 763 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 DLX2Q07687 328 aaPredicted RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 PTK2BQ14289 1009 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 C18orf21Q32NC0 220 aaPredicted RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 BNC2Q6ZN30 1099 aaPredicted RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 KLHDC8BQ8IXV7 354 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 ATL1Q8WXF7 558 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 SKA1Q96BD8 255 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 NPAS2Q99743 824 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 LRMDAQ9H2I8 198 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 FBRSL1Q9HCM7 1045 aaKnown RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 IMP3Q9NV31 184 aaKnown RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 CD207Q9UJ71 328 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 MIA3Q5JRA6 1907 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 DOCK4Q8N1I0 1966 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 CACNB4O00305 520 aaPredicted RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 TXNDC9O14530 226 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 RGS14O43566 566 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 ASGR2P07307 311 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 C8GP07360 202 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 RPSAP08865 295 aaKnown RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 ITGB7P26010 798 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 NTSR1P30989 418 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 MSX2P35548 267 aaPredicted RBP9.15□□□□□ -0.94
SSR3-201ENST00000265044 SH3BP2P78314 561 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 MESP2Q0VG99 397 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 CBLBQ13191 982 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 KRT72Q14CN4 511 aa9.15□□□□□ -0.94
SSR3-201ENST00000265044 LRRC36Q1X8D7 754 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms