RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RCOR3Q9P2K3 495 aaPredicted RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 PCDHGC3Q9UN70 934 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 WBP11Q9Y2W2 641 aaKnown RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CCDC162PA2VCL2 907 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 MYCLP1P12525 358 aaPredicted RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 MNDAP41218 407 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SEPHS1P49903 392 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 LIMK2P53671 638 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CRY2Q49AN0 593 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SNX20Q7Z614 316 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 GIPC3Q8TF64 312 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 GNEQ9Y223 722 aaKnown RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 MFHAS1Q9Y4C4 1052 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 IRAK3Q9Y616 596 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 RGS10O43665 173 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 NOBOXO60393 691 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 LGR5O75473 907 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 PBX3P40426 434 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CSKP41240 450 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 ASMTP46597 345 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 RPS6KA3P51812 740 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 LAPTM5Q13571 262 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SMCO1Q147U7 214 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 ATP13A5Q4VNC0 1218 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 TTC29Q8NA56 475 aaPredicted RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 FAM13CQ8NE31 585 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 OR10A6Q8NH74 314 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SCAMP5Q8TAC9 235 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 ZNF570Q96NI8 536 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CDK15Q96Q40 435 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 HEPHQ9BQS7 1158 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 TRMOQ9BU70 441 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SLC25A51Q9H1U9 297 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 A0A0G2JN53 185 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CHRNB2P17787 502 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CTSOP43234 321 aaPredicted RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 ASPAP45381 313 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 DGKGP49619 791 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 RALGPS1Q5JS13 557 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 OR2L5Q8NG80 312 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 HERVK_113Q902F9 699 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SMPDL3BQ92485 455 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SCLYQ96I15 445 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 ACBD6Q9BR61 282 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SALL4Q9UJQ4 1053 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 COMMD3-BMI1R4GMX3 469 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 RIIAD1A6NNX1 92 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 HCN1O60741 890 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 STATHP02808 62 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CHRM5P08912 532 aaPredicted RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CYP3A5P20815 502 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 GNALP38405 381 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 PLA2G16P53816 162 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 COPS4Q9BT78 406 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 TRPS1Q9UHF7 1281 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 A0A1B0GVM2 712 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 IRGMA1A4Y4 181 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 TCAF2A6NFQ2 919 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 IFNW1P05000 195 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 PTPN2P17706 415 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 FUT4P22083 530 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 PRKCHP24723 683 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 SLC1A2P43004 574 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 SLC13A2Q13183 592 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 C5orf22Q49AR2 442 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 UBAP2Q5T6F2 1119 aaKnown RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 SLC8B1Q6J4K2 584 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 ERICH5Q6P6B1 374 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 MEIOBQ8N635 442 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 FATE1Q969F0 183 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 OR2AG1Q9H205 316 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 SRMSQ9H3Y6 488 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 CTPS2Q9NRF8 586 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 PCDHGA3Q9Y5H0 932 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 LTN1O94822 1766 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 OR51F1A6NGY5 319 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 FADS2P1A8MWK0 482 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 IFNA6P05013 189 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 THRBP10828 461 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 COL6A2P12110 1019 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 LILRA4P59901 499 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 FKBP1BP68106 108 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 ATAT1Q5SQI0 421 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 CRELD2Q6UXH1 353 aaPredicted RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 THAP5Q7Z6K1 395 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 HDDC3Q8N4P3 179 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 ARL10Q8N8L6 244 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 NLGN2Q8NFZ4 835 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 AUTS2Q8WXX7 1259 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 NKD1Q969G9 470 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 PLD4Q96BZ4 506 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 HNRNPABQ99729 332 aaKnown RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 HMGXB4Q9UGU5 601 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 POP4O95707 220 aaKnown RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 DDX6P26196 483 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 LCP2Q13094 533 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms