RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 VPS4AQ9UN37 437 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 ATP11BQ9Y2G3 1177 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 SAMHD1Q9Y3Z3 626 aaKnown RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.68□□□□□ -1.66
USP44-201ENST00000258499 ST14Q9Y5Y6 855 aa4.68□□□□□ -1.66
USP44-201ENST00000258499 GNG14A0A1W2PPG7 69 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RBM47A0AV96 593 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 TBKBP1A7MCY6 615 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 UPK3BL1B0FP48 263 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 UPK3BL2E5RIL1 263 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 H3BMQ9 156 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 CXCR6O00574 342 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 KPNA4O00629 521 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 BCKDKO14874 412 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RGS5O15539 181 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 FFAR2O15552 330 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ACSL4O60488 711 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TBL1XO60907 577 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 DUSP11O75319 330 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 RECQL5O94762 991 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 SERPINA1P01009 418 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 HSD17B1P14061 328 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ELNP15502 786 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PBLDP30039 288 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 OR1D2P34982 312 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RECQLP46063 649 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 ALDH7A1P49419 539 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 SEPHS1P49903 392 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ST13P50502 369 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 BCL2L1Q07817 233 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 KCNAB2Q13303 367 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 GTDC1Q4AE62 458 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 HECTD3Q5T447 861 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 INTS11Q5TA45 600 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 ASTLQ6HA08 431 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 LCN8Q6JVE9 175 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 NECAB2Q7Z6G3 386 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TAGAPQ8N103 731 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 DTWD1Q8N5C7 304 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ARL10Q8N8L6 244 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 HMGCLL1Q8TB92 370 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TMEM125Q96AQ2 219 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 L3HYPDHQ96EM0 354 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 MED8Q96G25 268 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 NSMCE3Q96MG7 304 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 COG8Q96MW5 612 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PANX1Q96RD7 426 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RTP3Q9BQQ7 232 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 EBPLQ9BY08 206 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 DERL2Q9GZP9 239 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ATG10Q9H0Y0 220 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TUBB1Q9H4B7 451 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 DDX28Q9NUL7 540 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 ARMC1Q9NVT9 282 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 IMPAD1Q9NX62 359 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SPASTQ9UBP0 616 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 CD300AQ9UGN4 299 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SSC5DA1L4H1 1573 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TTC3P53804 2025 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SHROOM3Q8TF72 1996 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SH3PXD2BA1X283 911 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 K7EPI3 171 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PRAMEF11O60813 436 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 MYO1DO94832 1006 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SEC24AO95486 1093 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ZNF865P0CJ78 1059 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 DBTP11182 482 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 COL6A1P12109 1028 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 CDH1P12830 882 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 MYF6P23409 242 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 DGKAP23743 735 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 IGFBP5P24593 272 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 VARSP26640 1264 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 GKP32189 559 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SLC26A3P40879 764 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RGRP47804 291 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 FLT3LGP49771 235 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ATP4BP51164 291 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ERVPABLB-1P60509 514 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SMAD3P84022 425 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 MAD2L1Q13257 205 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 PABPC1LQ4VXU2 614 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 RFTN2Q52LD8 501 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 SULT1C3Q6IMI6 304 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 LETMD1Q6P1Q0 360 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 FAM171BQ6P995 826 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ENPP6Q6UWR7 440 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 AHSA2Q719I0 299 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PAGE2Q7Z2X7 111 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 LYSMD3Q7Z3D4 306 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 GALNT10Q86SR1 603 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 C11orf74Q86VG3 221 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SERPINA9Q86WD7 417 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 EPHX4Q8IUS5 362 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SYT12Q8IV01 421 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 CCDC103Q8IW40 242 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SYTL1Q8IYJ3 562 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 KIAA2013Q8IYS2 634 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 STK40Q8N2I9 435 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PGBD5Q8N414 524 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms