RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 NOCTQ9UK39 431 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNRF3Q9ULT6 936 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CPED1A4D0V7 1026 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 IPO13O94829 963 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PTPN1P18031 435 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RPA3P35244 121 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NR0B1P51843 470 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SPCS3P61009 180 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 GPC5P78333 572 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CCNA1P78396 465 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CYP51A1Q16850 503 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 Q5PR19 223 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PIK3R6Q5UE93 754 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC30A6Q6NXT4 461 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PNCKQ6P2M8 343 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 VSTM1Q6UX27 236 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 C7orf61Q8IZ16 206 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 IL17RCQ8NAC3 791 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ATP6V1C2Q8NEY4 427 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 C10orf82Q8WW14 230 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM162AQ96A26 154 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 COQ10AQ96MF6 247 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 FUZQ9BT04 418 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RNF32Q9H0A6 362 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 GHITMQ9H3K2 345 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TDRD3Q9H7E2 651 aaKnown RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SEPT9Q9UHD8 586 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CDC14AQ9UNH5 594 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 GOLT1BQ9Y3E0 138 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PHLPP1O60346 1717 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 A0A0A0MRY4 1105 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NPIPA2E9PIF3 369 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 HS6ST1O60243 411 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ABCB7O75027 752 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 PIGRP01833 764 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TRAPPC2P0DI81 140 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 TRAPPC2BP0DI82 140 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 NAGAP17050 411 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 DNASE1P24855 282 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RGS1Q08116 209 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 FIGNQ5HY92 759 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ILDR2Q71H61 639 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 RBFAQ8N0V3 343 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 LRCH3Q96II8 777 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 GAD1Q99259 594 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC30A2Q9BRI3 323 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 OR51V1Q9H2C8 321 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 CFAP97Q9P2B7 532 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 IFT80Q9P2H3 777 aaPredicted RBP6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 ATP8B3O60423 1300 aa6.67□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC35F4A4IF30 521 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PRR5-ARHGAP8B1AHC4 643 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MYL12BO14950 172 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PGRMC2O15173 223 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 DCXO43602 365 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SULT1C4O75897 302 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PGRP06401 933 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 C8BP07358 591 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 HLA-EP13747 358 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MYL12AP19105 171 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CYP2A7P20853 494 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ANXA11P50995 505 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ANTXR2P58335 489 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ARHGAP8P85298 464 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FGD3Q5JSP0 725 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 UBAP2Q5T6F2 1119 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 C16orf46Q6P387 395 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SHC4Q6S5L8 630 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 USP45Q70EL2 814 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NKX2-3Q8TAU0 364 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MFFQ9GZY8 342 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 C11orf49Q9H6J7 331 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 XPNPEP1Q9NQW7 623 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC38A7Q9NVC3 462 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 UXTQ9UBK9 157 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MIOXQ9UGB7 285 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PCDHAC2Q9Y5I4 1007 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 GRK5P34947 590 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 GRM2Q14416 872 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 TCTE1Q5JU00 501 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM198BQ6UWH4 519 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 DCXRQ7Z4W1 244 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SLITRK4Q8IW52 837 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ACTRT2Q8TDY3 377 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC25A23Q9BV35 468 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 C1QTNF7Q9BXJ2 289 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF350Q9GZX5 532 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NRBP2Q9NSY0 501 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 BFARQ9NZS9 450 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 GMPR2Q9P2T1 348 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 hCG_1807616A0A1W2PRN6 198 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SMCO3A2RU48 225 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FABP12A6NFH5 140 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 RPLP0P05388 317 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CSN2P05814 226 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ADH7P40394 386 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NKX6-1P78426 367 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CHRNA6Q15825 494 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 KRBOX4Q5JUW0 171 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FNBP1LQ5T0N5 605 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms