RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 ACTR5Q9H9F9 607 aaPredicted RBP11.91□□□□□ -0.5
NIP7-201ENST00000254940 GOLGA4Q13439 2230 aaKnown RBP11.91□□□□□ -0.5
NIP7-201ENST00000254940 TMEM131Q92545 1883 aa11.91□□□□□ -0.5
NIP7-201ENST00000254940 RALGAPA1Q6GYQ0 2036 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 KRT87PA6NCN2 255 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ZBTB14O43829 449 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 NIPSNAP2O75323 286 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 RASSF9O75901 435 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 DCTN3O75935 186 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 KLHL2O95198 593 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 PAPSS2O95340 614 aaPredicted RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 FUCA1P04066 466 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 HNRNPA2B1P22626 353 aaKnown RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 CTSCP53634 463 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 SFSWAPQ12872 951 aaKnown RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 RCN2Q14257 317 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ARL13AQ5H913 290 aaPredicted RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 TCEAL6Q6IPX3 200 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 SNX20Q7Z614 316 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 SLC22A18ASQ8N1D0 253 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 PRSS33Q8NF86 280 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 OR6Y1Q8NGX8 325 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 LKAAEAR1Q8TD35 194 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 TCEAL3Q969E4 200 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 WDR55Q9H6Y2 383 aaPredicted RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 WDR26Q9H7D7 661 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 G3BP2Q9UN86 482 aaKnown RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 TP53BP1Q12888 1972 aaPredicted RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 A0A1W2PPC4 97 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 PPP6CO00743 305 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ZNF195O14628 629 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 FPGTO14772 594 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 TRIM13O60858 407 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 NDUFS3O75489 264 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 CDK3Q00526 305 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ACVR1Q04771 509 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 CACNG1Q06432 222 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 CYB5D1Q6P9G0 228 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ENPP7Q6UWV6 458 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 NXPE1Q8N323 547 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 TRAM1L1Q8N609 369 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 LILRA3Q8N6C8 439 aaPredicted RBP11.9□□□□□ -0.5
NIP7-201ENST00000254940 GLYATL1Q969I3 302 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 PTERQ96BW5 349 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 MIPEPQ99797 713 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 APOOQ9BUR5 198 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ZSCAN32Q9NX65 697 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 NSMCE4AQ9NXX6 385 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ATXN10Q9UBB4 475 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 ZDHHC2Q9UIJ5 367 aa11.9□□□□□ -0.5
NIP7-201ENST00000254940 RIF1Q5UIP0 2472 aaKnown RBP11.9□□□□□ -0.51
NIP7-201ENST00000254940 PRR5-ARHGAP8B1AHC4 643 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 PSMD11O00231 422 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 DIAPH2O60879 1101 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 SDC3O75056 442 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 DNAJC8O75937 253 aaPredicted RBP11.89□□□□□ -0.51
NIP7-201ENST00000254940 HSPA4LO95757 839 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 CFIP05156 583 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 THEGLP0DJG4 465 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 AKT2P31751 481 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 SUOXP51687 545 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 ELF3P78545 371 aaPredicted RBP11.89□□□□□ -0.51
NIP7-201ENST00000254940 ARHGAP8P85298 464 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 POU4F1Q01851 419 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 TUBB3Q13509 450 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 LYSMD4Q5XG99 296 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 WDR75Q8IWA0 830 aaKnown RBP11.89□□□□□ -0.51
NIP7-201ENST00000254940 RBFAQ8N0V3 343 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 RASGEF1AQ8N9B8 481 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 GIMAP7Q8NHV1 300 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 PPP4R1Q8TF05 950 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 FOXJ1Q92949 421 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 BIRC8Q96P09 236 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 PLEKHG4BQ96PX9 1271 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 IER2Q9BTL4 223 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 COG4Q9H9E3 785 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 FGF22Q9HCT0 170 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 TM9SF3Q9HD45 589 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 ZNHIT2Q9UHR6 403 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 FBXO4Q9UKT5 387 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 A0A1B0GVT2 93 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 E9PBE3 544 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 KLHL41O60662 606 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 TRIM16O95361 564 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 ENO1P06733 434 aaKnown RBP11.89□□□□□ -0.51
NIP7-201ENST00000254940 ZNF8P17098 575 aaPredicted RBP11.89□□□□□ -0.51
NIP7-201ENST00000254940 ACRV1P26436 265 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 C1orf61Q13536 156 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 CTSL3PQ5NE16 218 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 PMS2CLQ68D20 193 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 ZYG11AQ6WRX3 759 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 SFTPA2Q8IWL1 248 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 TRIM42Q8IWZ5 723 aa11.89□□□□□ -0.51
NIP7-201ENST00000254940 LSMEM2Q8N112 164 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms