RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 ILF2Q12905 390 aaKnown RBP17.14■□□□□ 0.33
HOXC6-201ENST00000243108 STX3Q13277 289 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 TAF1BQ53T94 588 aaPredicted RBP17.14■□□□□ 0.33
HOXC6-201ENST00000243108 HES3Q5TGS1 186 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 OR6Y1Q8NGX8 325 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 BLOC1S5Q8TDH9 187 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 STYXQ8WUJ0 223 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 FUBP1Q96AE4 644 aaKnown RBP17.14■□□□□ 0.33
HOXC6-201ENST00000243108 THAP1Q9NVV9 213 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 NLGN3Q9NZ94 848 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 TLK1Q9UKI8 766 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 PCDHGC4Q9Y5F7 938 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 RAI2Q9Y5P3 530 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 ARL5AQ9Y689 179 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 RP1P56715 2156 aa17.14■□□□□ 0.33
HOXC6-201ENST00000243108 A8MX80 341 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 APOA4P06727 396 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CRABP2P29373 138 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 PRAMEP78395 509 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 BCL2L1Q07817 233 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 AGERQ15109 404 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CNSTQ6PJW8 725 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 PLA2G15Q8NCC3 412 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 GPR150Q8NGU9 434 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 DNAJC1Q96KC8 554 aaKnown RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CCDC86Q9H6F5 360 aaKnown RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 KCNK13Q9HB14 408 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 FBXO6Q9NRD1 293 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 G3V2L1 256 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 AURKAO14965 403 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 PHGDHO43175 533 aaKnown RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 AQP9O43315 295 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 HTRA2O43464 458 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CRTAMO95727 393 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 SERPINE1P05121 402 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CKMT1AP12532 417 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CPA3P15088 417 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 STMN1P16949 149 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 GRK2P25098 689 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 ZNF140P52738 457 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 TAS2R39P59534 338 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 AP1S1P61966 158 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 YPEL5P62699 121 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 INSM1Q01101 510 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CYP4F3Q08477 520 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 BNIP1Q12981 228 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 ILKQ13418 452 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 PTPRRQ15256 657 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 ERAP2Q6P179 960 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 RAPH1Q70E73 1250 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 C10orf107Q8IVU9 208 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CEP97Q8IW35 865 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 CENPLQ8N0S6 344 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 PELI3Q8N2H9 469 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 OR6P1Q8NGX9 317 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 RDH11Q8TC12 318 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 TBATAQ96M53 351 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 C20orf27Q9GZN8 174 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 NMRAL1Q9HBL8 299 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 NLE1Q9NVX2 485 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-201ENST00000243108 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 SPO11Q9Y5K1 396 aa17.13■□□□□ 0.33
HOXC6-201ENST00000243108 S1PR4O95977 384 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 CELA2BP08218 269 aaPredicted RBP17.12■□□□□ 0.33
HOXC6-201ENST00000243108 JUPP14923 745 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 THOP1P52888 689 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 TRAF2Q12933 501 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 TARDBPQ13148 414 aaKnown RBP eCLIP17.12■□□□□ 0.33
HOXC6-201ENST00000243108 C1orf61Q13536 156 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 INPP5AQ14642 412 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 TAF1AQ15573 450 aaPredicted RBP17.12■□□□□ 0.33
HOXC6-201ENST00000243108 DEFB133Q30KQ1 61 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 ZNF789Q5FWF6 425 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 SPDYAQ5MJ70 313 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 LIPIQ6XZB0 460 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 ZCCHC23Q6ZST2 131 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 TMEM151AQ8N4L1 468 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 FAM181AQ8N9Y4 354 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 LMX1AQ8TE12 382 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 ELMO2Q96JJ3 720 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 LRRC61Q9BV99 259 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 C1QTNF7Q9BXJ2 289 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 ADGRE3Q9BY15 652 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 CLPBQ9H078 707 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 MARCH4Q9P2E8 410 aaPredicted RBP17.12■□□□□ 0.33
HOXC6-201ENST00000243108 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 ACOT9Q9Y305 439 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 OR1A2Q9Y585 309 aa17.12■□□□□ 0.33
HOXC6-201ENST00000243108 URB1O60287 2271 aaKnown RBP17.11■□□□□ 0.33
HOXC6-201ENST00000243108 A0A087X1B8 175 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 CCDC162PA2VCL2 907 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 NEMP2A6NFY4 417 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 CCL22O00626 93 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 CASC3O15234 703 aaKnown RBP17.11■□□□□ 0.33
HOXC6-201ENST00000243108 DNAJC8O75937 253 aaPredicted RBP17.11■□□□□ 0.33
HOXC6-201ENST00000243108 PDHA1P08559 390 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 PIRTP0C851 137 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 DAB2P98082 770 aa17.11■□□□□ 0.33
HOXC6-201ENST00000243108 SETDB1Q15047 1291 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms