RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 NAF1Q96HR8 494 aaKnown RBP18.16■□□□□ 0.5
HOXC11-201ENST00000243082 CCT7Q99832 543 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 EGFL8Q99944 293 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 CD244Q9BZW8 370 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 EBF3Q9H4W6 596 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 IPPKQ9H8X2 491 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 SUN2Q9UH99 717 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 YBX2Q9Y2T7 364 aaKnown RBP18.16■□□□□ 0.5
HOXC11-201ENST00000243082 CAPN1P07384 714 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 GDF5P43026 501 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 MRPL19P49406 292 aaKnown RBP18.16■□□□□ 0.5
HOXC11-201ENST00000243082 MUM1Q2TAK8 710 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 HACD2Q6Y1H2 254 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 Q6ZSR9 355 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 DPPA4Q7L190 304 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 RETREG3Q86VR2 466 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 METTL6Q8TCB7 284 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 UBTD2Q8WUN7 234 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 H3BNX3 289 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 EIF3FO00303 357 aaPredicted RBP18.15■□□□□ 0.5
HOXC11-201ENST00000243082 MTX2O75431 263 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 OTCP00480 354 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 HTR6P50406 440 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 IRX1P78414 480 aaPredicted RBP18.15■□□□□ 0.5
HOXC11-201ENST00000243082 KCNC3Q14003 757 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 CMPK2Q5EBM0 449 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 HENMT1Q5T8I9 393 aaKnown RBP18.15■□□□□ 0.5
HOXC11-201ENST00000243082 TECPR1Q7Z6L1 1165 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 RSRC1Q96IZ7 334 aaKnown RBP18.15■□□□□ 0.5
HOXC11-201ENST00000243082 SLC52A3Q9NQ40 469 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 PFDN4Q9NQP4 134 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 AIG1Q9NVV5 245 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 WWOXQ9NZC7 414 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 NFKBIL1Q9UBC1 381 aaPredicted RBP18.15■□□□□ 0.5
HOXC11-201ENST00000243082 BBIP1A8MTZ0 92 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 NR5A2O00482 541 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 TRIM38O00635 465 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 ACOT8O14734 319 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 SGTAO43765 313 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 KATNA1O75449 491 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 CAPN3P20807 821 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 ATP6V1C1P21283 382 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 NFKBIAP25963 317 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 AKT1P31749 480 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 ST8SIA6P61647 398 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 FLOT2Q14254 428 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 VPS26BQ4G0F5 336 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 C6orf136Q5SQH8 315 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 SERPINA13PQ6UXR4 307 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 MBOAT1Q6ZNC8 495 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 TRAM1L1Q8N609 369 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 PPFIBP2Q8ND30 876 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 ST13P5Q8NFI4 369 aaPredicted RBP18.15■□□□□ 0.5
HOXC11-201ENST00000243082 GDPD5Q8WTR4 605 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 FGF13Q92913 245 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 SMARCD2Q92925 531 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 ATP6V1E2Q96A05 226 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 RIOK2Q9BVS4 552 aaKnown RBP18.15■□□□□ 0.5
HOXC11-201ENST00000243082 RIC8BQ9NVN3 520 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 ADA2Q9NZK5 511 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 MAP10Q9P2G4 905 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 CROTQ9UKG9 612 aa18.15■□□□□ 0.5
HOXC11-201ENST00000243082 ATG2AQ2TAZ0 1938 aa18.14■□□□□ 0.5
HOXC11-201ENST00000243082 FADS2P1A8MWK0 482 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 C9JVG2 144 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 NUAK1O60285 661 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 XPAP23025 273 aaPredicted RBP18.14■□□□□ 0.49
HOXC11-201ENST00000243082 MMP12P39900 470 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 ARL1P40616 181 aaPredicted RBP18.14■□□□□ 0.49
HOXC11-201ENST00000243082 HSPA14Q0VDF9 509 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 GRIK2Q13002 908 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 RPS6KA2Q15349 733 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 SHHQ15465 462 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 METTL2BQ6P1Q9 378 aaKnown RBP18.14■□□□□ 0.49
HOXC11-201ENST00000243082 LAYNQ6UX15 382 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 PARS2Q7L3T8 475 aaKnown RBP18.14■□□□□ 0.49
HOXC11-201ENST00000243082 MILR1Q7Z6M3 343 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 DHDDSQ86SQ9 333 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 VRK3Q8IV63 474 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 KBTBD2Q8IY47 623 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 DCUN1D1Q96GG9 259 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 SLC45A3Q96JT2 553 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 BRINP2Q9C0B6 783 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 SFXN1Q9H9B4 322 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 OPTCQ9UBM4 332 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 PDE10AQ9Y233 779 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 RANBP2P49792 3224 aaKnown RBP18.14■□□□□ 0.49
HOXC11-201ENST00000243082 C2orf16Q68DN1 1984 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 PLXNA2O75051 1894 aa18.14■□□□□ 0.49
HOXC11-201ENST00000243082 BCAS2O75934 225 aaPredicted RBP18.13■□□□□ 0.49
HOXC11-201ENST00000243082 NFATC1O95644 943 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 ACADSP16219 412 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 FSHRP23945 695 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 PBX2P40425 430 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 ZFP36L2P47974 494 aaKnown RBP18.13■□□□□ 0.49
HOXC11-201ENST00000243082 RPIAP49247 311 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 ERVK-8P63133 956 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 CREB5Q02930 508 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 BLOC1S3Q6QNY0 202 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 IL27RAQ6UWB1 636 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms