RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SUV39H1O43463 412 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CFHP08603 1231 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 AIMP2Q13155 320 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 TLR1Q15399 786 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CRTC2Q53ET0 693 aaPredicted RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 HSDL2Q6YN16 418 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CHCHD4Q8N4Q1 142 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 SENP8Q96LD8 212 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 TM9SF3Q9HD45 589 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 MTMR10Q9NXD2 777 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 TNS3Q68CZ2 1445 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CLCA1A8K7I4 914 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 SLC28A1O00337 649 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 B3GALNT1O75752 331 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CYP1A1P04798 512 aaPredicted RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 RPLP0P05388 317 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 MMP3P08254 477 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 RORCP51449 518 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 MANFP55145 182 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 NFIAQ12857 509 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 MOGSQ13724 837 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 THAP6Q8TBB0 222 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 RBM4BQ9BQ04 359 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 RBM4Q9BWF3 364 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 DNPEPQ9ULA0 475 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 BARX2Q9UMQ3 279 aaPredicted RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 IRGMA1A4Y4 181 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 NPIPA7E9PJI5 369 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 MSCO60682 206 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 NPIPA8P0DM63 369 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.654e-7■■■■■ 30.4
MSH6-201ENST00000234420 RABGGTBP53611 331 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 RAB15P59190 212 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 RPL38P63173 70 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 ELP6Q0PNE2 266 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 ZC3H12AQ5D1E8 599 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 EIF5AL1Q6IS14 154 aaKnown RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 NELL1Q92832 810 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 ACE2Q9BYF1 805 aaPredicted RBP10.98□□□□□ -0.65
MSH6-201ENST00000234420 B3GNT4Q9C0J1 378 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 LMAN2LQ9H0V9 348 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 C11orf49Q9H6J7 331 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 CISHQ9NSE2 258 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 GNG13Q9P2W3 67 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 FBXL3Q9UKT7 428 aa10.98□□□□□ -0.65
MSH6-201ENST00000234420 RIC1Q4ADV7 1423 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 C13orf42A0A1B0GVH6 325 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 FARS2O95363 451 aaKnown RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 ZSCAN5DPP0CG00 497 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 FOXO4P98177 505 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 RRP1BQ14684 758 aaKnown RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 MAPK14Q16539 360 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 GTF2IRD2BQ6EKJ0 949 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 GTF2IRD2Q86UP8 949 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 CBR4Q8N4T8 237 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 FAM46DQ8NEK8 389 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 RAB2BQ8WUD1 216 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 LINGO1Q96FE5 620 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 TIPINQ9BVW5 301 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 C1orf196B1AJZ1 125 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 OIP5O43482 229 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 CDH13P55290 713 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 FPGSQ05932 587 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 AUHQ13825 339 aaKnown RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 LAPTM4BQ86VI4 370 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 GALNT13Q8IUC8 556 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 PEX13Q92968 403 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 ANKRA2Q9H9E1 313 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 SMPD3Q9NY59 655 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 TAS2R7Q9NYW3 318 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 ARHGAP20Q9P2F6 1191 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 UBQLN2Q9UHD9 624 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 SAP18O00422 153 aaKnown RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 OR4Q2P0C623 313 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 SLC6A2P23975 617 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 CREMQ03060 361 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 PRKCDQ05655 676 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 QSOX2Q6ZRP7 698 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 TCEAL3Q969E4 200 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 PANX1Q96RD7 426 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 OR51B6Q9H340 312 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 ZNF705FA8MVS1 300 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 SLC37A4O43826 429 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 ZNF705DP0CH99 300 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 ZNF705BP0CI00 300 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 PITPNAQ00169 270 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 RAB39AQ14964 217 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 KCTD19Q17RG1 926 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 KLHL35Q6PF15 583 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 GK5Q6ZS86 529 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 METTL3Q86U44 580 aaKnown RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 RALGPS2Q86X27 583 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 ETNPPLQ8TBG4 499 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 HEPHQ9BQS7 1158 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 LYPLA1O75608 230 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 CYB5AP00167 134 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 LCN1P31025 176 aa10.97□□□□□ -0.65
MSH6-201ENST00000234420 RNF144AP50876 292 aaPredicted RBP10.97□□□□□ -0.65
MSH6-201ENST00000234420 VLDLRP98155 873 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms