RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PNPT1Q8TCS8 783 aaKnown RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 PLD4Q96BZ4 506 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 CWH43Q9H720 699 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 RRAGCQ9HB90 399 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 PLGRKTQ9HBL7 147 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 TMEM165Q9HC07 324 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 IL17CQ9P0M4 197 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 TSR3Q9UJK0 312 aaKnown RBP16.02■□□□□ 0.16
LTBR-201ENST00000228918 BRCA2P51587 3418 aa16.02■□□□□ 0.16
LTBR-201ENST00000228918 TMX2-CTNND1H3BSU7 103 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 PRMT5O14744 637 aaPredicted RBP16.02■□□□□ 0.15
LTBR-201ENST00000228918 CPNE6O95741 557 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 CORO1AP31146 461 aaKnown RBP16.02■□□□□ 0.15
LTBR-201ENST00000228918 KIAA0040Q15053 153 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 RFTN2Q52LD8 501 aaPredicted RBP16.02■□□□□ 0.15
LTBR-201ENST00000228918 GPR107Q5VW38 600 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 RGMBQ6NW40 437 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 LINGO4Q6UY18 593 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 CROCCP3Q8IVE0 287 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 TMBIM1Q969X1 311 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 CCDC115Q96NT0 180 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 FAF1Q9UNN5 650 aaPredicted RBP16.02■□□□□ 0.15
LTBR-201ENST00000228918 SH3GLB1Q9Y371 365 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 PCDHB1Q9Y5F3 818 aa16.02■□□□□ 0.15
LTBR-201ENST00000228918 TRIM64BA6NI03 449 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 H7C4K7 107 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 FFAR2O15552 330 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 COCHO43405 550 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 KATNA1O75449 491 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 STC2O76061 302 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 OTCP00480 354 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 S100BP04271 92 aaPredicted RBP16.01■□□□□ 0.15
LTBR-201ENST00000228918 ALPLP05186 524 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 COL6A1P12109 1028 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 ACLYP53396 1101 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 CBX3Q13185 183 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 FAM98BQ52LJ0 330 aaKnown RBP16.01■□□□□ 0.15
LTBR-201ENST00000228918 TMEM26Q6ZUK4 368 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 CHST15Q7LFX5 561 aaPredicted RBP16.01■□□□□ 0.15
LTBR-201ENST00000228918 CHCHD4Q8N4Q1 142 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 ZNF513Q8N8E2 541 aaPredicted RBP16.01■□□□□ 0.15
LTBR-201ENST00000228918 FNDC8Q8TC99 324 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 CCDC97Q96F63 343 aaPredicted RBP16.01■□□□□ 0.15
LTBR-201ENST00000228918 ZNF583Q96ND8 569 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 MUS81Q96NY9 551 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 TBCCD1Q9NVR7 557 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 SMPD4Q9NXE4 827 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 LHX3Q9UBR4 397 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 ZNF711Q9Y462 761 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 CCL27Q9Y4X3 112 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 CASP8AP2Q9UKL3 1982 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 ZNF840PA6NDX5 716 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 TSPAN3O60637 253 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 ALDH2P05091 517 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 SLC10A3P09131 477 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 TCF3P15923 654 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 HMOX2P30519 316 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 NEDD8Q15843 81 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 PLA2G4EQ3MJ16 856 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 ZIK1Q3SY52 487 aaPredicted RBP16.01■□□□□ 0.15
LTBR-201ENST00000228918 HECTD3Q5T447 861 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 ELMSAN1Q6PJG2 1045 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 PRSS55Q6UWB4 352 aaPredicted RBP16.01■□□□□ 0.15
LTBR-201ENST00000228918 ITIH5Q86UX2 942 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 EID2BQ96D98 161 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 HSPBAP1Q96EW2 488 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 TUBA1CQ9BQE3 449 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 IPPKQ9H8X2 491 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 VAPAQ9P0L0 249 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 PKP3Q9Y446 797 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 SLC30A1Q9Y6M5 507 aa16.01■□□□□ 0.15
LTBR-201ENST00000228918 NT5C1B-RDH14C9J2C7 533 aa16■□□□□ 0.15
LTBR-201ENST00000228918 RAD51BO15315 384 aa16■□□□□ 0.15
LTBR-201ENST00000228918 MAGEB3O15480 346 aa16■□□□□ 0.15
LTBR-201ENST00000228918 FZD6O60353 706 aa16■□□□□ 0.15
LTBR-201ENST00000228918 DFNA5O60443 496 aa16■□□□□ 0.15
LTBR-201ENST00000228918 KCNH1O95259 989 aa16■□□□□ 0.15
LTBR-201ENST00000228918 THRBP10828 461 aa16■□□□□ 0.15
LTBR-201ENST00000228918 NFKBIAP25963 317 aa16■□□□□ 0.15
LTBR-201ENST00000228918 ELK4P28324 431 aa16■□□□□ 0.15
LTBR-201ENST00000228918 SHMT2P34897 504 aa16■□□□□ 0.15
LTBR-201ENST00000228918 RPL38P63173 70 aaKnown RBP16■□□□□ 0.15
LTBR-201ENST00000228918 CHRNB3Q05901 458 aa16■□□□□ 0.15
LTBR-201ENST00000228918 TWF1Q12792 350 aa16■□□□□ 0.15
LTBR-201ENST00000228918 ZNF773Q6PK81 442 aa16■□□□□ 0.15
LTBR-201ENST00000228918 ANKS3Q6ZW76 656 aa16■□□□□ 0.15
LTBR-201ENST00000228918 TMEM173Q86WV6 379 aaPredicted RBP16■□□□□ 0.15
LTBR-201ENST00000228918 AADATQ8N5Z0 425 aa16■□□□□ 0.15
LTBR-201ENST00000228918 PDZD8Q8NEN9 1154 aa16■□□□□ 0.15
LTBR-201ENST00000228918 SLC13A3Q8WWT9 602 aa16■□□□□ 0.15
LTBR-201ENST00000228918 CNDP2Q96KP4 475 aaKnown RBP16■□□□□ 0.15
LTBR-201ENST00000228918 PPP3R2Q96LZ3 170 aa16■□□□□ 0.15
LTBR-201ENST00000228918 NAA50Q9GZZ1 169 aaKnown RBP16■□□□□ 0.15
LTBR-201ENST00000228918 NSUN3Q9H649 340 aaKnown RBP16■□□□□ 0.15
LTBR-201ENST00000228918 CARS2Q9HA77 564 aaKnown RBP16■□□□□ 0.15
LTBR-201ENST00000228918 GKN1Q9NS71 199 aa16■□□□□ 0.15
LTBR-201ENST00000228918 A0A1W2PPW3 197 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms