RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 CCDC68Q9H2F9 335 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 GNPTGQ9UJJ9 305 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 PLEKHM1Q9Y4G2 1056 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 PCDHB1Q9Y5F3 818 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 DGKBQ9Y6T7 804 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 KMOO15229 486 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 YKT6O15498 198 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 NIPSNAP2O75323 286 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 POP7O75817 140 aaKnown RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 CSF2P04141 144 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 INHBAP08476 426 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 ACP5P13686 325 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 NME1P15531 152 aaKnown RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 MSH2P43246 934 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 PRLHRP49683 370 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 BLKP51451 505 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 CSE1LP55060 971 aaKnown RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 ADARP55265 1226 aaKnown RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 RBM20Q5T481 1227 aaKnown RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 GRTP1Q5TC63 336 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 CHST15Q7LFX5 561 aaPredicted RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 TMPRSS12Q86WS5 348 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 KRT222Q8N1A0 295 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 GPATCH11Q8N954 259 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 LKAAEAR1Q8TD35 194 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 SLC44A1Q8WWI5 657 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 FAM136AQ96C01 138 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 ZNF514Q96K75 400 aaPredicted RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 PAFAH2Q99487 392 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 RBBP8Q99708 897 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 AARSD1Q9BTE6 412 aaKnown RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 SLC13A1Q9BZW2 595 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 TMEM168Q9H0V1 697 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 RHOJQ9H4E5 214 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 ARGLU1Q9NWB6 273 aaPredicted RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 FAM8A1Q9UBU6 413 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 SLC23A2Q9UGH3 650 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 APOBEC3BQ9UH17 382 aaKnown RBP16.12■□□□□ 0.17
LIM2-201ENST00000221973 GPR34Q9UPC5 381 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 IKBKGQ9Y6K9 419 aa16.12■□□□□ 0.17
LIM2-201ENST00000221973 F8W8V4 182 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 H3BM21 787 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 QSOX1O00391 747 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 SDC3O75056 442 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 LDOC1O95751 146 aaPredicted RBP16.11■□□□□ 0.17
LIM2-201ENST00000221973 FTH1P02794 183 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 CTSEP14091 401 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 H2AFXP16104 143 aaPredicted RBP16.11■□□□□ 0.17
LIM2-201ENST00000221973 CHRM3P20309 590 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 ARRB1P49407 418 aaPredicted RBP16.11■□□□□ 0.17
LIM2-201ENST00000221973 C1orf61Q13536 156 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 INSCQ1MX18 579 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 PRRT3Q5FWE3 981 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 FBXO38Q6PIJ6 1188 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 PDZD3Q86UT5 571 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 OXR1Q8N573 874 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 OR2W6PQ8NHA6 318 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 VPS39Q96JC1 886 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 ELMO2Q96JJ3 720 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 CCM2Q9BSQ5 444 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 MCMBPQ9BTE3 642 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 SARS2Q9NP81 518 aaKnown RBP16.11■□□□□ 0.17
LIM2-201ENST00000221973 DNAJC16Q9Y2G8 782 aa16.11■□□□□ 0.17
LIM2-201ENST00000221973 MTO1Q9Y2Z2 717 aaKnown RBP16.11■□□□□ 0.17
LIM2-201ENST00000221973 SMIM23A6NLE4 172 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 E5RI56 91 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 H3BMM5 538 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 RFPL3O75679 317 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 NUDT17P0C025 328 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 SAT1P21673 171 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 GCAP28676 217 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 SPRP35270 261 aaPredicted RBP16.1■□□□□ 0.17
LIM2-201ENST00000221973 HNRNPKP61978 463 aaKnown RBP eCLIP16.1■□□□□ 0.17
LIM2-201ENST00000221973 CTBSQ01459 385 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 IFFO1Q0D2I5 559 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 SOWAHCQ53LP3 525 aaPredicted RBP16.1■□□□□ 0.17
LIM2-201ENST00000221973 HECTD2Q5U5R9 776 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 NAPRTQ6XQN6 538 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 C11orf96Q7Z7L8 435 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 AMZ2Q86W34 360 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 ACVR1CQ8NER5 493 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 CCL4L1Q8NHW4 92 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 LMX1AQ8TE12 382 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 DCAKDQ8WVC6 231 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 ELMO1Q92556 727 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 LINC00615Q96LM1 132 aaPredicted RBP16.1■□□□□ 0.17
LIM2-201ENST00000221973 LRRC61Q9BV99 259 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 TSSK1BQ9BXA7 367 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 KLC4Q9NSK0 619 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 TRNAU1APQ9NX07 287 aaKnown RBP16.1■□□□□ 0.17
LIM2-201ENST00000221973 GALPQ9UBC7 116 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 CORO1CQ9ULV4 474 aaPredicted RBP16.1■□□□□ 0.17
LIM2-201ENST00000221973 KCNK6Q9Y257 313 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 PLAAQ9Y263 795 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 COMMD10Q9Y6G5 202 aa16.1■□□□□ 0.17
LIM2-201ENST00000221973 DNMT3AQ9Y6K1 912 aaPredicted RBP16.1■□□□□ 0.17
LIM2-201ENST00000221973 ASXL3Q9C0F0 2248 aa16.09■□□□□ 0.17
LIM2-201ENST00000221973 A0A087WV48 116 aa16.09■□□□□ 0.17
LIM2-201ENST00000221973 FAM95CA0A1B0GW59 222 aa16.09■□□□□ 0.17
LIM2-201ENST00000221973 CELA2BP08218 269 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms