RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 ARSAP15289 507 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 CDK9P50750 372 aaKnown RBP10.45□□□□□ -0.74
VPS18-201ENST00000220509 SLC7A2P52569 658 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 ST8SIA6P61647 398 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 SYTL3Q4VX76 610 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 FUT10Q6P4F1 479 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 PIWIL4Q7Z3Z4 852 aaKnown RBP10.45□□□□□ -0.74
VPS18-201ENST00000220509 ADGRG6Q86SQ4 1221 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 CLEC4FQ8N1N0 589 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 TRIM63Q969Q1 353 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 NTAN1Q96AB6 310 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 CEP19Q96LK0 163 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 KLHL32Q96NJ5 620 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 MCCC2Q9HCC0 563 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 ZDHHC7Q9NXF8 308 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 RAD54BQ9Y620 910 aa10.45□□□□□ -0.74
VPS18-201ENST00000220509 MOXD2PA6NHM9 499 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 ALDOAP04075 364 aaKnown RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 TTKP33981 857 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 SCNN1AP37088 669 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 CXCR3P49682 368 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 CLCN5P51795 746 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 KRT33BQ14525 404 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 TRNP1Q6NT89 227 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 UGT3A1Q6NUS8 523 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 DCBLD1Q8N8Z6 715 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 KCTD13Q8WZ19 329 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 ELMO1Q92556 727 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 FATE1Q969F0 183 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 ZMYM5Q9UJ78 669 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 PCOLCE2Q9UKZ9 415 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 BTRCQ9Y297 605 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 CAB39Q9Y376 341 aaPredicted RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 PCDHGC4Q9Y5F7 938 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 A0A087X1B8 175 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 C7orf72A4D263 438 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 OR51F1A6NGY5 319 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 FAM159BA6NKW6 160 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 OR6C75A6NL08 312 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 TBL1XO60907 577 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 FKTNO75072 461 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 ALX3O95076 343 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 PFKMP08237 780 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 IKBKEQ14164 716 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 GPR158Q5T848 1215 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 DHFR2Q86XF0 187 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 ZNF280BQ86YH2 543 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 BBS7Q8IWZ6 715 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 CCDC116Q8IYX3 515 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 FSTL5Q8N475 847 aaPredicted RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 RTL3Q8N8U3 475 aaKnown RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 METTL6Q8TCB7 284 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 FBXL20Q96IG2 436 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 MRPL57Q9BQC6 102 aaKnown RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 MLPHQ9BV36 600 aaPredicted RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 MRM3Q9HC36 420 aaKnown RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 HTTP42858 3142 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 POLR1CO15160 346 aaPredicted RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 TP53P04637 393 aaPredicted RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 RHOQP17081 205 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 GATMP50440 423 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 SLC10A7Q0GE19 358 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 DNASE1L3Q13609 305 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 GRM2Q14416 872 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 USP41Q3LFD5 358 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 TTLL9Q3SXZ7 439 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 MAVSQ7Z434 540 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 FNDC5Q8NAU1 212 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 OR4K2Q8NGD2 314 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 TSGA13Q96PP4 275 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 DEPDC7Q96QD5 511 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 CDK5RAP1Q96SZ6 601 aaKnown RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 SEC22CQ9BRL7 303 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 OSBPL11Q9BXB4 747 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.44□□□□□ -0.74
VPS18-201ENST00000220509 HIPK3Q9H422 1215 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 TRIM45Q9H8W5 580 aaPredicted RBP10.44□□□□□ -0.74
VPS18-201ENST00000220509 DYRK4Q9NR20 520 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 PCDHB8Q9UN66 801 aa10.44□□□□□ -0.74
VPS18-201ENST00000220509 FADS2P1A8MWK0 482 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 E7ENX8 843 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 HLA-DQB2P05538 268 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 KRT8P05787 483 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 CYBAP13498 195 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 SELPP16109 830 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 IDUAP35475 653 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 PRKAA2P54646 552 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 ARMC12Q5T9G4 340 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 ZNF296Q8WUU4 475 aaPredicted RBP10.43□□□□□ -0.74
VPS18-201ENST00000220509 CANT1Q8WVQ1 401 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 HTRA1Q92743 480 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 ZNF566Q969W8 418 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 CCDC120Q96HB5 630 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 CYP2S1Q96SQ9 504 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 DHRS4Q9BTZ2 278 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 POLE4Q9NR33 117 aa10.43□□□□□ -0.74
VPS18-201ENST00000220509 GMPR2Q9P2T1 348 aaKnown RBP10.43□□□□□ -0.74
VPS18-201ENST00000220509 AGO1Q9UL18 857 aaKnown RBP10.43□□□□□ -0.74
VPS18-201ENST00000220509 TCAF1Q9Y4C2 921 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms