RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 IQCF5A8MTL0 148 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 MEN1O00255 615 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 ARPC2O15144 300 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 IGKV5-2P06315 115 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 ITGA2BP08514 1039 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 TIGD2Q4W5G0 525 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF311Q5JNZ3 666 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 CAND1Q86VP6 1230 aaKnown RBP14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 FBXW2Q9UKT8 454 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 HDCP19113 662 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 AVPR1BP47901 424 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 LUMP51884 338 aaPredicted RBP14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 RAB4BP61018 213 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 DSG2Q14126 1118 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 DLG2Q15700 870 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 FBXO15Q8NCQ5 510 aaPredicted RBP14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 RDH11Q8TC12 318 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 NSMCE3Q96MG7 304 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 LACRTQ9GZZ8 138 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SNX15Q9NRS6 342 aa14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 SMPD3Q9NY59 655 aaPredicted RBP14.45□□□□□ -0.1
SPTLC2-201ENST00000216484 DAPL1A0PJW8 107 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 ADAMDEC1O15204 470 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 IFNW1P05000 195 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 YES1P07947 543 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 RYKP34925 604 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 GRB10Q13322 594 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 KLHL22Q53GT1 634 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 ARMC5Q96C12 935 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 TESMINQ9Y4I5 508 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 CAPN8A6NHC0 703 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 hCG_2039718K7EN88 272 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 SNX3O60493 162 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 BCAS1O75363 584 aaPredicted RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 ARP10275 920 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 ADRA2BP18089 450 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 CAPN13Q6MZZ7 669 aaPredicted RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 OR8D1Q8WZ84 308 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 REREQ9P2R6 1566 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 C3orf33Q6P1S2 294 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 BEND7Q8N7W2 519 aaPredicted RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 OR6K2Q8NGY2 324 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 TTYH2Q9BSA4 534 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 EBPLQ9BY08 206 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF717Q9BY31 904 aaPredicted RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 HCKP08631 526 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 RPL22P35268 128 aaKnown RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 RGS6P49758 472 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 TARDBPQ13148 414 aaKnown RBP eCLIP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 ZC3H12AQ5D1E8 599 aaKnown RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 CPSF7Q8N684 471 aaKnown RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 SPATA22Q8NHS9 363 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 GDF3Q9NR23 364 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 MRPS23Q9Y3D9 190 aaKnown RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 C2orf92A0A1B0GVN3 265 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 MAD2L1BPQ15013 274 aaPredicted RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 MOXD1Q6UVY6 613 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 C7orf61Q8IZ16 206 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 HEXDCQ8WVB3 486 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 OR10A4Q9H209 315 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 ARHGEF17Q96PE2 2063 aaPredicted RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 NOBOXO60393 691 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 KCNJ13O60928 360 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 UBXN7O94888 489 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 CFL1P23528 166 aaKnown RBP14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 PTPN6P29350 595 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC7A1P30825 629 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 MAPK8P45983 427 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 DUPD1Q68J44 220 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 CREG2Q8IUH2 290 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 COX18Q8N8Q8 333 aa14.44□□□□□ -0.1
SPTLC2-201ENST00000216484 LCN1P31025 176 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 KIR3DL1P43629 444 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 METTL7BQ6UX53 244 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC44A3Q8N4M1 653 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 PROKR2Q8NFJ6 384 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 ACMSDQ8TDX5 336 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 USP6P35125 1406 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 CIB4A0PJX0 185 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 PRAMEF12O95522 483 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 BST1Q10588 318 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 TIGD6Q17RP2 521 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 SH3D19Q5HYK7 790 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 TIGD4Q8IY51 512 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 LDAHQ9H6V9 325 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 ITGAVP06756 1048 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 CLEC12AQ5QGZ9 265 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 CNDP2Q96KP4 475 aaKnown RBP14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 S100A14Q9HCY8 104 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 LATS1O95835 1130 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 PET100P0DJ07 73 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 HK1P19367 917 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 CDH13P55290 713 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 SBK1Q52WX2 424 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF517Q6ZMY9 492 aaPredicted RBP14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 EZH1Q92800 747 aaPredicted RBP14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 OR5B12Q96R08 314 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms