RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SLC25A14O95258 325 aaPredicted RBP12.93□□□□□ -0.34
CTNS-201ENST00000046640 CHEK2O96017 543 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 BMP2P12643 396 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 PSMD8P48556 350 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 KCNK10P57789 538 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 OGFOD2Q6N063 350 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 ELMSAN1Q6PJG2 1045 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 RFLNAQ6ZTI6 216 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 OR56A4Q8NGH8 313 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 PIH1D2Q8WWB5 315 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 MYRFLQ96LU7 910 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 EGFL8Q99944 293 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 CLPBQ9H078 707 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 ZFYVE1Q9HBF4 777 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 INTS7Q9NVH2 962 aaKnown RBP12.93□□□□□ -0.34
CTNS-201ENST00000046640 CFAP97Q9P2B7 532 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 ATP11BQ9Y2G3 1177 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 INSL5Q9Y5Q6 135 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 DOCK6Q96HP0 2047 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 KRT87PA6NCN2 255 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 ASPDHA6ND91 283 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 J3QRK9 145 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 PRMT5O14744 637 aaPredicted RBP12.93□□□□□ -0.34
CTNS-201ENST00000046640 PFDN6O15212 129 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 IDO1P14902 403 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 ELK4P28324 431 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 IL12AP29459 219 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 CD70P32970 193 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 HNF1BP35680 557 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 PTGER3P43115 390 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 DGKQP52824 942 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 EPHB3P54753 998 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 PPP1R8Q12972 351 aaKnown RBP12.93□□□□□ -0.34
CTNS-201ENST00000046640 TMEM214Q6NUQ4 689 aaKnown RBP12.93□□□□□ -0.34
CTNS-201ENST00000046640 SLC2A7Q6PXP3 512 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 TBPL2Q6SJ96 375 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 KCTD8Q6ZWB6 473 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 GPR180Q86V85 440 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 KCNJ9Q92806 393 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 TOP1MTQ969P6 601 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 FBXL8Q96CD0 374 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 MTFMTQ96DP5 389 aaKnown RBP12.93□□□□□ -0.34
CTNS-201ENST00000046640 RNF145Q96MT1 663 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 NPLQ9BXD5 320 aaPredicted RBP12.93□□□□□ -0.34
CTNS-201ENST00000046640 LTB4R2Q9NPC1 389 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 FAM8A1Q9UBU6 413 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 CIDEBQ9UHD4 219 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 TEX28O15482 410 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 SLC22A3O75751 556 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 URODP06132 367 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 HMGCLP35914 325 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 CACNG1Q06432 222 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 BCL2L1Q07817 233 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 MTA1Q13330 715 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 ATP1A4Q13733 1029 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 RAB39AQ14964 217 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 PHKG1Q16816 387 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 C6orf136Q5SQH8 315 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 C8orf82Q6P1X6 216 aaPredicted RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 Q6ZSR9 355 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 ZSWIM9Q86XI8 627 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 ADGRG2Q8IZP9 1017 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 OR4F6Q8NGB9 312 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 FNDC8Q8TC99 324 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 OVCA2Q8WZ82 227 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 KCTD14Q9BQ13 255 aaPredicted RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 IL26Q9NPH9 171 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 FARSBQ9NSD9 589 aaKnown RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 BLOC1S6Q9UL45 172 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 OR51B4Q9Y5P0 310 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 A0A1W2PRU2 124 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 CCDC154A6NI56 674 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 PGLSO95336 258 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 BMP10O95393 424 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 UROSP10746 265 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 VARSP26640 1264 aaKnown RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 GSK3BP49841 420 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 LIPEQ05469 1076 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 CHRNA6Q15825 494 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 ZBED5Q49AG3 693 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 SLC44A4Q53GD3 710 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 AARS2Q5JTZ9 985 aaKnown RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 LDLRAP1Q5SW96 308 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 GAREM2Q75VX8 874 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 ADGRG5Q8IZF4 528 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 DHRSXQ8N5I4 330 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 HJURPQ8NCD3 748 aaPredicted RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 HM13Q8TCT9 377 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 ZNF558Q96NG5 402 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 UHRF1Q96T88 793 aaPredicted RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 GPATCH1Q9BRR8 931 aaKnown RBP12.92□□□□□ -0.34
CTNS-201ENST00000046640 IPPKQ9H8X2 491 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 LATS2Q9NRM7 1088 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 AGPAT4Q9NRZ5 378 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 ARMC1Q9NVT9 282 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
CTNS-201ENST00000046640 TTC36A6NLP5 189 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms