RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 POLHQ9Y253 713 aa15.5■□□□□ 0.07
ERCC1-201ENST00000013807 CCDC88CQ9P219 2028 aa15.5■□□□□ 0.07
ERCC1-201ENST00000013807 SNRNP200O75643 2136 aaKnown RBP15.49■□□□□ 0.07
ERCC1-201ENST00000013807 FER1L5A0AVI2 2057 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 IGLV3-16A0A075B6K0 115 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 CCDC66A2RUB6 948 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 CLEC18AA5D8T8 446 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 H7C0C1 242 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 PJA2O43164 708 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 MSL3P1P0C860 447 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 NDUFS1P28331 727 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 CYLC1P35663 651 aaPredicted RBP15.49■□□□□ 0.07
ERCC1-201ENST00000013807 ATP5OP48047 213 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 OTUD4Q01804 1114 aaKnown RBP15.49■□□□□ 0.07
ERCC1-201ENST00000013807 TUBB3Q13509 450 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 DNASE1L3Q13609 305 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 SPA17Q15506 151 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 SKIDA1Q1XH10 827 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 ZNF658BQ4V348 819 aaPredicted RBP15.49■□□□□ 0.07
ERCC1-201ENST00000013807 ATP1A1-AS1Q5TC04 95 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 C16orf46Q6P387 395 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 CLEC18BQ6UXF7 455 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 CLEC18CQ8NCF0 446 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 HEXDCQ8WVB3 486 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 COL26A1Q96A83 441 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 LRFN5Q96NI6 719 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 PANX2Q96RD6 677 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 CCM2Q9BSQ5 444 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 FICDQ9BVA6 458 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 OSBPL8Q9BZF1 889 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 WWP1Q9H0M0 922 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 ZNF71Q9NQZ8 489 aaPredicted RBP15.49■□□□□ 0.07
ERCC1-201ENST00000013807 LATS2Q9NRM7 1088 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 HRASLS2Q9NWW9 162 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 LNPEPQ9UIQ6 1025 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 TFR2Q9UP52 801 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 BTRCQ9Y297 605 aa15.49■□□□□ 0.07
ERCC1-201ENST00000013807 EPN1Q9Y6I3 576 aaPredicted RBP15.49■□□□□ 0.07
ERCC1-201ENST00000013807 TNRC6AQ8NDV7 1962 aaKnown RBP15.49■□□□□ 0.07
ERCC1-201ENST00000013807 H7C0S8 307 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 ZBTB11O95625 1053 aaPredicted RBP15.48■□□□□ 0.07
ERCC1-201ENST00000013807 CRTAMO95727 393 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 RBP3P10745 1247 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 CTNNA2P26232 953 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 AKT1P31749 480 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 HADHAP40939 763 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 PRLHRP49683 370 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 TUBB4BP68371 445 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 TUBB2AQ13885 445 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 ERV3-1Q14264 604 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 GPR33Q49SQ1 333 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 LACTB2Q53H82 288 aaPredicted RBP15.48■□□□□ 0.07
ERCC1-201ENST00000013807 DNTTIP2Q5QJE6 756 aaKnown RBP15.48■□□□□ 0.07
ERCC1-201ENST00000013807 OOSP2Q86WS3 158 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 CDKL3Q8IVW4 592 aaPredicted RBP15.48■□□□□ 0.07
ERCC1-201ENST00000013807 NXPE1Q8N323 547 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 ULK4Q96C45 1275 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 ZNF501Q96CX3 271 aaPredicted RBP15.48■□□□□ 0.07
ERCC1-201ENST00000013807 ELMO2Q96JJ3 720 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 C12orf66Q96MD2 445 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 SPATA13Q96N96 652 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 TUBB2BQ9BVA1 445 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 TRIM5Q9C035 493 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 C10orf88Q9H8K7 445 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 IMP3Q9NV31 184 aaKnown RBP15.48■□□□□ 0.07
ERCC1-201ENST00000013807 FKBPLQ9UIM3 349 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 HEBP2Q9Y5Z4 205 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 COLEC10Q9Y6Z7 277 aa15.48■□□□□ 0.07
ERCC1-201ENST00000013807 TRBV5-4A0A0C4DH59 114 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 RCCD1A6NED2 376 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 F5H423 210 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-201ENST00000013807 MKRN2OSH3BPM6 223 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 LDB2O43679 373 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 RALBP11234 206 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 PSMA3P25788 255 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 PSMB4P28070 264 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 ZNF140P52738 457 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-201ENST00000013807 PMS2P54278 862 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 KLRB1Q12918 225 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 SPTAN1Q13813 2472 aaKnown RBP15.47■□□□□ 0.07
ERCC1-201ENST00000013807 PRPSAP1Q14558 356 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 KCNAB1Q14722 419 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 COLEC12Q5KU26 742 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 KCTD11Q693B1 232 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 SNX20Q7Z614 316 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 TMTC1Q8IUR5 882 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-201ENST00000013807 HM13Q8TCT9 377 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 CT55Q8WUE5 264 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 THAP4Q8WY91 577 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 AKIRIN1Q9H9L7 192 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-201ENST00000013807 SYTL2Q9HCH5 934 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 KCND1Q9NSA2 647 aa15.47■□□□□ 0.07
ERCC1-201ENST00000013807 CFAP20Q9Y6A4 193 aaKnown RBP15.47■□□□□ 0.07
ERCC1-201ENST00000013807 SPTBN1Q01082 2364 aaKnown RBP15.47■□□□□ 0.07
ERCC1-201ENST00000013807 UBA6A0AVT1 1052 aaPredicted RBP15.46■□□□□ 0.07
ERCC1-201ENST00000013807 MATN2O00339 956 aa15.46■□□□□ 0.07
ERCC1-201ENST00000013807 STK10O94804 968 aaKnown RBP15.46■□□□□ 0.07
ERCC1-201ENST00000013807 TJP3O95049 919 aa15.46■□□□□ 0.07
ERCC1-201ENST00000013807 GSTM1P09488 218 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms