RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Lrig1P70193 1091 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tmem184cQ3TPR7 525 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ppm1hQ3UYC0 513 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Six3Q62233 333 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Bcl2l1Q64373 233 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Olfr295Q7TS08 309 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Dsg1bQ7TSF1 1060 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gpr139Q80UC8 345 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Actr5Q80US4 605 aaKnown RBP13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tmc7Q8C428 726 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 MmaaQ8C7H1 415 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cfap61Q8CEL2 1252 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Usp45Q8K387 813 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Slc5a9Q8VDT1 685 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rmnd5bQ91YQ7 393 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Dach2Q925Q8 634 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Smim11aQ99J19 55 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Nck1Q99M51 377 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Dnaaf1Q9D2H9 634 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Kbtbd12Q9D618 625 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cyp3a44Q9EQW4 504 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 St6galnac1Q9QZ39 526 aa13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 H2afyQ9QZQ8 372 aaKnown RBP13.25□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gm43518A0A0G2JGB6 165 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gbp4A4UUI3 631 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tmem45a2B7ZWJ5 289 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ddx43D3Z6P9 646 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Olfr620E9PZ66 313 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Atn1O35126 1175 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cxcr3O88410 367 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Stam2O88811 523 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 P01636 108 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 RxraP28700 467 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Csf3rP40223 837 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Epb41P48193 858 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Prox1P48437 737 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 St14P56677 855 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Dusp2Q05922 318 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tex24Q5DP50 351 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Adora2aQ60613 410 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Eps15l1Q60902 907 aaKnown RBP13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 HadhQ61425 314 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cox14Q8BH51 57 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 B430218F22RikQ8BQR5 223 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Unc5aQ8K1S4 898 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vps11Q91W86 941 aaKnown RBP13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Oas1cQ924S2 362 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pdzd3Q99MJ6 498 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pole4Q9CQ36 118 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Syvn1Q9DBY1 612 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vmn2r-ps130A0A140T8U3 855 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Fam166bA2AIP0 273 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pnldc1B2RXZ1 531 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Armc4B2RY50 1037 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Tmem233D3Z1U7 110 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gm2832F7AEC7 200 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Slc9a3G3X939 829 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Kcnk4O88454 398 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ctla2bP12400 113 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Hnf1bP27889 558 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Clec4fP70194 548 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 SirpaP97797 513 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Fpr-rs6Q3SXG2 339 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gm4981Q3ULJ8 291 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Axdnd1Q3UZ57 424 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rab26Q504M8 260 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rabl6Q5U3K5 725 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 XpaQ64267 272 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Atg16l2Q6KAU8 623 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ston2Q8BZ60 895 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vps26bQ8C0E2 336 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Zbtb9Q8CDC7 459 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Slc30a5Q8R4H9 761 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Phf10Q9D8M7 497 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cyp2g1Q9WV19 494 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Elf4Q9Z2U4 655 aa13.24□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gm11758A2BEI6 360 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gm11757A2BEI8 360 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pde9aO70628 534 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 DdcO88533 480 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pebp1P70296 187 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pla2g5P97391 137 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 LcorlQ3U285 600 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Q3UY34 256 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Syce1lQ5D525 247 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 G2e3Q5RJY2 716 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Snx32Q80ZJ7 404 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Znf750Q8BH05 703 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Mtrf1lQ8BJU9 373 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Pabpc5Q8C7D3 381 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Wdr74Q8VCG3 384 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Slc35b2Q91ZN5 431 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Dctn2Q99KJ8 402 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cmc1Q9CPZ8 106 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 TrirQ9D735 173 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gpr63Q9EQQ3 425 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cmtm7Q9ESD6 167 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rfc2Q9WUK4 349 aaKnown RBP13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Jbts17Q8CE72 3214 aa13.23□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gm3147A0A0J9YU88 481 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms