RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Pcdhga6Q91XY2 932 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Sp2Q9D2H6 612 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Lamb1P02469 1786 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tubb1A2AQ07 451 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Otud3B1AZ99 396 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rhox13F6YCR7 232 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Akain1G3UWD5 69 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gstm1P10649 218 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 F8a1Q00558 380 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Trpc1Q61056 793 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Deup1Q7M6Y5 601 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Eme1Q8BJW7 570 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Q8BWQ6 963 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn1r219Q8R271 312 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Arpc2Q9CVB6 300 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mau2Q9D2X5 619 aaKnown RBP11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Efcab1Q9D3N2 212 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cmpk1Q9DBP5 196 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fads2Q9Z0R9 444 aaKnown RBP11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cldn7Q9Z261 211 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr1200A2ATJ4 336 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Nt5c1aA3KFX0 365 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ccr4P51680 360 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Smad5P97454 465 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Nr2f1Q60632 422 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 RfflQ6ZQM0 377 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mfn2Q80U63 757 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Kirrel1Q80W68 789 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fam83eQ80XS7 481 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ap5m1Q8BJ63 490 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ccdc59Q8R2N0 240 aaKnown RBP11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 DcxrQ91X52 244 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Prpf19Q99KP6 504 aaKnown RBP11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pou5f2Q9DAC9 329 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mid2Q9QUS6 705 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cdh22Q9WTP5 813 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Carm1Q9WVG6 608 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr738L7N1X7 311 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn2r57L7N269 863 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 AmacrO09174 381 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Smpd1Q04519 627 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Kcnh6Q32ME0 950 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ap5b1Q3TAP4 876 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Eps15l1Q60902 907 aaKnown RBP11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Q6P1I3 445 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fgl1Q71KU9 314 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc17a6Q8BLE7 582 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Micu1Q8VCX5 477 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Wrnip1Q91XU0 660 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 5330417H12RikQ9D3P2 110 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pop5Q9DB28 169 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Abcb9Q9JJ59 762 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Klhl3E0CZ16 587 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Prf1P10820 554 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Stat6P52633 837 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Dlg3P70175 849 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Grb7Q03160 535 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Lix1Q6P566 282 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 OsgepQ8BWU5 335 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mapre2Q8R001 326 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc22a17Q9D9E0 401 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pi16Q9ET66 489 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Arhgap36B1AUC7 590 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pros1Q08761 675 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Zfp78Q5U406 512 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Sh3gl3Q62421 347 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tlr12Q6QNU9 906 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cand1Q6ZQ38 1230 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Sdhaf3Q8BQU3 125 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Snrnp27Q8K194 155 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tnfaip8Q921Z5 198 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm16286Q9CQX6 220 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Actrt1Q9D9J3 376 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Scnn1gQ9WU39 655 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mtm1Q9Z2C5 603 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 H2-BlV9GXR0 257 aa11.72□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm8237E9Q257 205 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 GzmkO35205 263 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Atp1b2P14231 290 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Alox12P39655 663 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Adcyap1r1P70205 496 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tmprss15P97435 1069 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Emc10Q3TAS6 258 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ttc29Q80VM3 471 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gadl1Q80WP8 550 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pcyox1lQ8C7K6 495 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Samd14Q8K070 417 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mcoln3Q8R4F0 553 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr846Q8VET8 312 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 DhddsQ99KU1 333 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mgrn1Q9D074 532 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gbe1Q9D6Y9 702 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn1r55E9Q8I6 310 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rb1P13405 921 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Spire1Q52KF3 598 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc10a7Q5PT53 340 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 MafkQ61827 156 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Aldh3b1Q80VQ0 468 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Luzp2Q8BGY3 345 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr382Q8VF79 312 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms