RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Ssxb8B1AY40 170 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Nsmce4aG3XA30 381 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 P01668 110 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Msr1P30204 458 aaKnown RBP20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 OxtrP97926 388 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Tmc5Q32NZ6 967 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Pag1Q3U1F9 429 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Mfsd3Q5U419 412 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Foxj1Q61660 421 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 PtprcapQ64697 197 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Ints6Q6PCM2 883 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Rslcan18Q7M6X5 460 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Far2Q7TNT2 515 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Parp9Q8CAS9 866 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Vmn1r206Q8R277 312 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Mark1Q8VHJ5 795 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Fcf1Q9CTH6 198 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Pus10Q9D3U0 527 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 CtsmQ9JL96 333 aa20.11■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gm5751A2AHC8 147 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Vmn2r74E9PW21 853 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 P01740 135 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Klk1b8P07628 261 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Ncam1P13595 1115 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Myf6P15375 242 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Tmprss9P69525 1065 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Hbq1bQ3U0A6 142 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Rabl6Q5U3K5 725 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Cypt4Q6P925 153 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Kctd2Q8CEZ0 266 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Exd2Q8VEG4 650 aaKnown RBP20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Ndufs2Q91WD5 463 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Tcf7l2Q924A0 459 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Ackr4Q924I3 350 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Snrpb2Q9CQI7 225 aaKnown RBP20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gm12248A0A1W2P8B8 313 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 CercamA3KGW5 592 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Cldn4O35054 210 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 GzmkO35205 263 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Cyp4a14O35728 507 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gp1baO35930 734 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 HcrtO55241 130 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 CamkvQ3UHL1 512 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Znf280cQ6P3Y5 742 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Tmem62Q8BXJ9 643 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Fam129bQ8R1F1 749 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Retreg3Q9CQV4 466 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Clvs1Q9D4C9 354 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 P2yr13Q9D8I2 337 aa20.1■□□□□ 0.81
Trim47-201ENSMUST00000021120 Zfp952B0V2W4 504 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Zbtb10E9Q8X5 861 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Slc9a3G3X939 829 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Vmn2r61L7N2B8 865 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Capn5O08688 640 aaKnown RBP20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 MrasO08989 208 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Krt1P04104 637 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Pabpc1P29341 636 aaKnown RBP20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Rin3P59729 980 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 EsrrgP62509 458 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Zmym5Q3U2E2 627 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gm4951Q3UED7 406 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Olfr464Q5SW48 313 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Olfr297Q7TS07 310 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Bend5Q8C6D4 421 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Spp2Q8K1I3 203 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Usb1Q91W78 267 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Smim11aQ99J19 55 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Rgs10Q9CQE5 181 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 RhoaQ9QUI0 193 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Fhl5Q9WTX7 284 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Aqp5Q9WTY4 265 aa20.09■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gm6509A0A0J9YUV1 481 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gm10718D3Z1I7 227 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Olfr596F8VQ26 312 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gm6351K9J7D1 481 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Vmn2r46L7N282 809 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 LatO54957 242 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 PolP11369 1281 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Arcn1Q5XJY5 511 aaKnown RBP20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Hs3st2Q673U1 367 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Ip6k1Q6PD10 433 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Letm2Q7TNU7 480 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Fam83eQ80XS7 481 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Them6Q80ZW2 207 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Lair1Q8BG84 263 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gm6377Q8BHV4 303 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 DseQ8BLI4 958 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Gfm2Q8R2Q4 779 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Acsf2Q8VCW8 615 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Tnip2Q99JG7 430 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 PclafQ9CQX4 110 aaKnown RBP20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 XpotQ9CRT8 963 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Rnf146Q9CZW6 359 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Tmbim6Q9D2C7 237 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Apbb2Q9DBR4 760 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Rgs3Q9DC04 966 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 MecrQ9DCS3 373 aa20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Keap1Q9Z2X8 624 aaKnown RBP20.08■□□□□ 0.81
Trim47-201ENSMUST00000021120 Olfr742A2RTP5 311 aa20.08■□□□□ 0.8
Trim47-201ENSMUST00000021120 Ankrd34aB2RW11 495 aa20.08■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms