RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PREBQ9HCU5 417 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 STARD7Q9NQZ5 370 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 VAPAQ9P0L0 249 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 LHX3Q9UBR4 397 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 ANAPC2Q9UJX6 822 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 RIMKLBQ9ULI2 386 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 PADI4Q9UM07 663 aa16.58■□□□□ 0.25
PHGDH-223ENST00000641597 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 ILVBLA1L0T0 632 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 ANKRD33BA6NCL7 494 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 TBL1XO60907 577 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 RASAL1O95294 804 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 ADGRF1Q5T601 910 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 GLYATQ6IB77 296 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 CYP20A1Q6UW02 462 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 KCNJ9Q92806 393 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 C1QTNF3Q9BXJ4 246 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 TRIM15Q9C019 465 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 NTN4Q9HB63 628 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 IL17CQ9P0M4 197 aa16.58■□□□□ 0.24
PHGDH-223ENST00000641597 LEF1Q9UJU2 399 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-223ENST00000641597 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 A0A1B0GVM2 712 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 H0Y858 1186 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 GAPDHSO14556 408 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-223ENST00000641597 LSM1O15116 133 aaKnown RBP16.57■□□□□ 0.24
PHGDH-223ENST00000641597 TAPBPO15533 448 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 MYF6P23409 242 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ELK4P28324 431 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 RPL38P63173 70 aaKnown RBP16.57■□□□□ 0.24
PHGDH-223ENST00000641597 PMS2P3Q13401 168 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 GTDC1Q4AE62 458 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 NCEH1Q6PIU2 408 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 SPRED1Q7Z699 444 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ZFAND4Q86XD8 727 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 KRTCAP2Q8N6L1 136 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 GAB3Q8WWW8 586 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ISG20Q96AZ6 181 aaKnown RBP16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ADGRE3Q9BY15 652 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 P2RY12Q9H244 342 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 CLEC4EQ9ULY5 219 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 SLC8A2Q9UPR5 921 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ZNF711Q9Y462 761 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 MAGEB3O15480 346 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 PRAMEF1O95521 474 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 C1QCP02747 245 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 POLR2IP36954 125 aaKnown RBP16.57■□□□□ 0.24
PHGDH-223ENST00000641597 GALK1P51570 392 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 RHOAP61586 193 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 PRKG2Q13237 762 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 GTF2H2Q13888 395 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 NKG7Q16617 165 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 GTF2H2CQ6P1K8 395 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 BORAQ6PGQ7 559 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ITIH5Q86UX2 942 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 SERPINA9Q86WD7 417 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 PTRH1Q86Y79 214 aaKnown RBP16.57■□□□□ 0.24
PHGDH-223ENST00000641597 SLC22A15Q8IZD6 547 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 APCDD1Q8J025 514 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ZNF382Q96SR6 550 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 TBCDQ9BTW9 1192 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 C9orf16Q9BUW7 83 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 TTLL2Q9BWV7 592 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 SLC6A13Q9NSD5 602 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ATXN10Q9UBB4 475 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 ZNHIT2Q9UHR6 403 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 LRFN2Q9ULH4 789 aa16.57■□□□□ 0.24
PHGDH-223ENST00000641597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 FAM234BA2RU67 622 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 ANKRD28O15084 1053 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 VPS4BO75351 444 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 SLC2A4P14672 509 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 NFKBIAP25963 317 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 RPS9P46781 194 aaKnown RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 CDK9P50750 372 aaKnown RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 HPCAP84074 193 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 NEDD8Q15843 81 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 ENPP6Q6UWR7 440 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 FAM126BQ8IXS8 530 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 ADGRG2Q8IZP9 1017 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 C10orf111Q8N326 155 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 PAF1Q8N7H5 531 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 AUTS2Q8WXX7 1259 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 NUSAP1Q9BXS6 441 aaKnown RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 VPS51Q9UID3 782 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 ARIH1Q9Y4X5 557 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 FFAR2O15552 330 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 BNIP3LO60238 219 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 CLDN7O95471 211 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 CSKP41240 450 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 KPNA1P52294 538 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 EMX2Q04743 252 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 TRAF3Q13114 568 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 PDCD4Q53EL6 469 aaKnown RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 PTRHD1Q6GMV3 140 aaKnown RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 FEM1AQ9BSK4 669 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 TNKS2Q9H2K2 1166 aa16.56■□□□□ 0.24
PHGDH-223ENST00000641597 SMPD3Q9NY59 655 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 MBD1Q9UIS9 605 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-223ENST00000641597 ST14Q9Y5Y6 855 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms