RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TNFRSF10AO00220 468 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 PRKCAP17252 672 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 PCMT1P22061 227 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 SERPINB10P48595 397 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 CDK5R2Q13319 367 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 GPR162Q16538 588 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 FAM98BQ52LJ0 330 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF648Q5T619 568 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 DENND5AQ6IQ26 1287 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 FKBP9P1Q75LS8 142 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 PLPPR4Q7Z2D5 763 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 APPL2Q8NEU8 664 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 RHOXF1Q8NHV9 184 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 TBATAQ96M53 351 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 WDCPQ9H6R7 721 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ZMYM5Q9UJ78 669 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 IKZF3Q9UKT9 509 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 INTS6Q9UL03 887 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF451Q9Y4E5 1061 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 WDR81Q562E7 1941 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 A0A1W2PP18 115 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 BCKDKO14874 412 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 DYRK3O43781 588 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 TSPAN1O60635 241 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 HNRNPFP52597 415 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 CRISP3P54108 245 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ISL1P61371 349 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 SNRPD2P62316 118 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ANKRD46Q86W74 232 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 FAM217AQ8IXS0 508 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 DTX3Q8N9I9 347 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 S100ZQ8WXG8 99 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 ZFP14Q9HCL3 533 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 AGO1Q9UL18 857 aaKnown RBP13.58□□□□□ -0.24
SCARB2-227ENST00000640957 PRELID1Q9Y255 219 aa13.58□□□□□ -0.24
SCARB2-227ENST00000640957 RGS5O15539 181 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 GAS2O43903 313 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 FAM20BO75063 409 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 SCO1O75880 301 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF682O95780 498 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 SLC25A27O95847 323 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 FYNP06241 537 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 CHRM5P08912 532 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 JUNBP17275 347 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 CD6P30203 668 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 EIF2DP41214 584 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 SNX16P57768 344 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 PAFAH1B3Q15102 231 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 ATAD3CQ5T2N8 411 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 ZCCHC8Q6NZY4 707 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 DYNC2LI1Q8TCX1 351 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 BLOC1S5Q8TDH9 187 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 EFHD2Q96C19 240 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 ARPC5LQ9BPX5 153 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 SLIRPQ9GZT3 109 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 ACTR8Q9H981 624 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 PCDHGA10Q9Y5H3 936 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 COMMD10Q9Y6G5 202 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 H0Y626 953 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 hCG_2039718K7EN88 272 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 CDC7O00311 574 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 UPK1BO75841 260 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TRIM16O95361 564 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 HLA-DQB2P05538 268 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 FAM189BP81408 668 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TRAF3Q13114 568 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TUBA3CQ13748 450 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 PTGR1Q14914 329 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 FBXO47Q5MNV8 452 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TTC23Q5W5X9 447 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TRAF7Q6Q0C0 670 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 B3GNT8Q7Z7M8 397 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 LRRC49Q8IUZ0 686 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 ATP6V0D2Q8N8Y2 350 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 OR7G1Q8NGA0 311 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 PNPT1Q8TCS8 783 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 HDAC2Q92769 488 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 FYTTD1Q96QD9 318 aaKnown RBP13.57□□□□□ -0.24
SCARB2-227ENST00000640957 CHCHD6Q9BRQ6 235 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 PRM3Q9NNZ6 103 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 NT5MQ9NPB1 228 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 VAPAQ9P0L0 249 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 MCM3APO60318 1980 aa13.57□□□□□ -0.24
SCARB2-227ENST00000640957 A0A087X1B8 175 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 TREHO43280 583 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 MYL3P08590 195 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 RBP1P09455 135 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 PPP5CP53041 499 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 POU4F1Q01851 419 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 TSNQ15631 228 aaKnown RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 PSMD5Q16401 504 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CYP2U1Q7Z449 544 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF560Q96MR9 790 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 COQ7Q99807 217 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms