RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 SLC7A5P2Q9GIP4 190 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 FANCEQ9HB96 536 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 SMTNL1A8MU46 457 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 BUD23O43709 281 aaKnown RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 UGT1A9O60656 530 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 PROSCO94903 275 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 LCA5LO95447 670 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 ZBTB11O95625 1053 aaPredicted RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 NDST3O95803 873 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 DDAH2O95865 285 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 MTHFD1P11586 935 aaKnown RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 UGT1A6P19224 532 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 UGT1A1P22309 533 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 UGT1A4P22310 534 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 KDELR1P24390 212 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 DCTP40126 519 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 TNNT3P45378 269 aaPredicted RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 KRT33BQ14525 404 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 ALKBH5Q6P6C2 394 aaKnown RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 RFX6Q8HWS3 928 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 D2HGDHQ8N465 521 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 SLC25A41Q8N5S1 370 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 PLD5Q8N7P1 536 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 BEND7Q8N7W2 519 aaPredicted RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 RASGEF1AQ8N9B8 481 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 Q8NA96 180 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 SLC38A9Q8NBW4 561 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 BRSK1Q8TDC3 778 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 CPT1BQ92523 772 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 FAF2Q96CS3 445 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 C19orf60Q96EN9 201 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 RNF157Q96PX1 679 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 CD180Q99467 661 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 MAK16Q9BXY0 300 aaKnown RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 WWP1Q9H0M0 922 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 SLC25A51Q9H1U9 297 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 UGT1A7Q9HAW7 530 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 UGT1A10Q9HAW8 530 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 UGT1A8Q9HAW9 530 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 MLXIPLQ9NP71 852 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 GPR83Q9NYM4 423 aa14.65□□□□□ -0.06
SYNE2-228ENST00000639659 BZW2Q9Y6E2 419 aaKnown RBP14.65□□□□□ -0.06
SYNE2-228ENST00000639659 A0A1B0GTH6 734 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 TMEM150CB9EJG8 249 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 MEN1O00255 615 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 APOL1O14791 398 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 PPP1R12AO14974 1030 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-228ENST00000639659 CLDN1O95832 211 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 SERPING1P05155 500 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 TNNT1P13805 278 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 POLR2CP19387 275 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-228ENST00000639659 CYP2A7P20853 494 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 LPOP22079 712 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-228ENST00000639659 CDH3P22223 829 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 OTX2P32243 289 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 SPAM1P38567 509 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 VAV2P52735 878 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 ITGA1P56199 1179 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 GSDMDP57764 484 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 ATP1A4Q13733 1029 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 LAMB3Q13751 1172 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 GSE1Q14687 1217 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 PTCHD3Q3KNS1 767 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 ODF2Q5BJF6 829 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 FNBP1LQ5T0N5 605 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 RBMXL3Q8N7X1 1067 aaKnown RBP14.64□□□□□ -0.07
SYNE2-228ENST00000639659 BLOC1S5Q8TDH9 187 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 PNPLA2Q96AD5 504 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 ZNF501Q96CX3 271 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-228ENST00000639659 GLOD4Q9HC38 313 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 SEMA5BQ9P283 1151 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 ERRFI1Q9UJM3 462 aaPredicted RBP14.64□□□□□ -0.07
SYNE2-228ENST00000639659 TCFL5Q9UL49 500 aa14.64□□□□□ -0.07
SYNE2-228ENST00000639659 A0A0A6YYK5 440 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-228ENST00000639659 GLYATL1P3A0A0U1RQE8 302 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 GSAPA4D1B5 854 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 KRT1P04264 644 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 SLC35G4P0C7Q5 338 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 HLA-DPA1P20036 260 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 MSH3P20585 1137 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 KPNA2P52292 529 aaKnown RBP14.63□□□□□ -0.07
SYNE2-228ENST00000639659 ABRQ12979 859 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 PRKAA1Q13131 559 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 MESDQ14696 234 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 PDK1Q15118 436 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 LDLRAP1Q5SW96 308 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 PLEKHS1Q5SXH7 462 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 GPRC6AQ5T6X5 926 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 IZUMO3Q5VZ72 239 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 PAPD7Q5XG87 772 aaKnown RBP14.63□□□□□ -0.07
SYNE2-228ENST00000639659 SYTL1Q8IYJ3 562 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 DSELQ8IZU8 1212 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-228ENST00000639659 ADAMTS17Q8TE56 1095 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 TCTN2Q96GX1 697 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 SGSM3Q96HU1 749 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 GBP4Q96PP9 640 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 INSM2Q96T92 566 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-228ENST00000639659 KLHL25Q9H0H3 589 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 ACTR5Q9H9F9 607 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms