RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 PSKH2Q96QS6 385 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 TASP1Q9H6P5 420 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 GPRC5BQ9NZH0 403 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 CDH22Q9UJ99 828 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 CHKBQ9Y259 395 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 KCTD3Q9Y597 815 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 REV3LO60673 3130 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 CEP290O15078 2479 aa12.64□□□□□ -0.39
CACNA1A-244ENST00000637625 RFXAPO00287 272 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 COPEO14579 308 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 ZMPSTE24O75844 475 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 VAPBO95292 243 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 ITGA2BP08514 1039 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 DRD4P21917 467 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 GP5P40197 560 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 MPP1Q00013 466 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CDK18Q07002 472 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CNGA3Q16281 694 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 MPPE1Q53F39 396 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 PRSS36Q5K4E3 855 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CDHR3Q6ZTQ4 885 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CPXM2Q8N436 756 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 OXR1Q8N573 874 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 PNPLA1Q8N8W4 532 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 OR6K2Q8NGY2 324 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 ITFG1Q8TB96 612 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 DENND1AQ8TEH3 1009 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 PDCD6IPQ8WUM4 868 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CKAP2Q8WWK9 683 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 TADA1Q96BN2 335 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 FAM111AQ96PZ2 611 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 TM6SF2Q9BZW4 377 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 RETREG1Q9H6L5 497 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 TDP1Q9NUW8 608 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 WNT6Q9Y6F9 365 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 MAGEB16A2A368 324 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 NEDD8-MDP1E9PL57 170 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 INSIG1O15503 277 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 FAM107AO95990 144 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 HNRNPA1P09651 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 FOXN2P32314 431 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 GATA4P43694 442 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 HK2P52789 917 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 PGGT1BP53609 377 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 RHOAP61586 193 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 NAB1Q13506 487 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 PTPRCAPQ14761 206 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 SLC14A2Q15849 920 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 FAM47EQ6ZV65 393 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 SH2D5Q6ZV89 423 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CYS1Q717R9 158 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CPLX4Q7Z7G2 160 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CCDC117Q8IWD4 279 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 DENND6AQ8IWF6 608 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 OTUD6BQ8N6M0 293 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 SMG7Q92540 1137 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 ALG14Q96F25 216 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 ZNF317Q96PQ6 595 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CPNE1Q99829 537 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 IQCGQ9H095 443 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 TLE6Q9H808 572 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 CAB39LQ9H9S4 337 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 LHX3Q9UBR4 397 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 ZNF510Q9Y2H8 683 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 OR51B4Q9Y5P0 310 aa12.63□□□□□ -0.39
CACNA1A-244ENST00000637625 HEATR9A2RTY3 570 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 LRRC14BA6NHZ5 514 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 ZWINTO95229 277 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 FGF19O95750 216 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 ALDOAP04075 364 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 CYBBP04839 570 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 CR2P20023 1033 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 SAT1P21673 171 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 DDX6P26196 483 aaKnown RBP eCLIP12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 HOXA9P31269 272 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 WASP42768 502 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 IRX4P78413 519 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 PDE1BQ01064 536 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 IL9RQ01113 521 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 SLC18A2Q05940 514 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 CTBP1Q13363 440 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 RFTN1Q14699 578 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 FYB2Q5VWT5 728 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 TMEM25Q86YD3 366 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 NDUFAF2Q8N183 169 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 DCLK2Q8N568 766 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 DCAF4L2Q8NA75 395 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 ACVR1CQ8NER5 493 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 VN1R2Q8NFZ6 395 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 RMDN1Q96DB5 314 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 MTBPQ96DY7 904 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 FEM1CQ96JP0 617 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 SAMD11Q96NU1 681 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 RBBP8Q99708 897 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
CACNA1A-244ENST00000637625 PRDM7Q9NQW5 492 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms