RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CLDN24	A6NM45	220 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	GABRD	O14764	452 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	NPHS1	O60500	1241 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	SERPINI2	O75830	405 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	CDK14	O94921	469 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	IFNA16	P05015	189 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	CSTF2	P33240	577 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	SPR	P35270	261 aa	Predicted RBP	10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	S100A12	P80511	92 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	FOXM1	Q08050	763 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	ADIG	Q0VDE8	80 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	SEMA3B	Q13214	749 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	SNTA1	Q13424	505 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	IL18R1	Q13478	541 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	PSMD5	Q16401	504 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	AGK	Q53H12	422 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	ARL13A	Q5H913	290 aa	Predicted RBP	10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	PPM1J	Q5JR12	505 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	TOR2A	Q5JU69	321 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	COLEC12	Q5KU26	742 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	TIGD3	Q6B0B8	471 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF534	Q76KX8	674 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	MRPL10	Q7Z7H8	261 aa	Known RBP	10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	PIGZ	Q86VD9	579 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	TMEM199	Q8N511	208 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	MINDY1	Q8N5J2	469 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF555	Q8NEP9	628 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	TTL	Q8NG68	377 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	TMCO6	Q96DC7	493 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	SENP8	Q96LD8	212 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	SLC9A7	Q96T83	725 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	MCMBP	Q9BTE3	642 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	RNF39	Q9H2S5	420 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	NMRAL1	Q9HBL8	299 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	GOLGA2P5	Q9HBQ8	144 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	WASH6P	Q9NQA3	447 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	MTMR10	Q9NXD2	777 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	GLTP	Q9NZD2	209 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	ZDHHC2	Q9UIJ5	367 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	TLR6	Q9Y2C9	796 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	BTBD3	Q9Y2F9	522 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	NME7	Q9Y5B8	376 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	PCDHGB2	Q9Y5G2	931 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	CSNK1G3	Q9Y6M4	447 aa		10.64	□□□□□ -0.71
CHD2-223	ENST00000636306	TDRD15	B5MCY1	1934 aa	Known RBP	10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	LINC00854	A0A1B0GVQ3	168 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	KRT87P	A6NCN2	255 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	UGT2B17	O75795	530 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	CNTN5	O94779	1100 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	CHRNG	P07510	517 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	ACADM	P11310	421 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	PGAM1	P18669	254 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	ATF4	P18848	351 aa	Predicted RBP	10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	ATF6	P18850	670 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	GRIA4	P48058	902 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	UGT2B15	P54855	530 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	MGAT3	Q09327	533 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	TNK1	Q13470	666 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	PLEKHG6	Q3KR16	790 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	SH3PXD2A	Q5TCZ1	1133 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	PIK3R6	Q5UE93	754 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	HEATR6	Q6AI08	1181 aa	Known RBP	10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	SDE2	Q6IQ49	451 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	GDF6	Q6KF10	455 aa	Predicted RBP	10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	CXCL17	Q6UXB2	119 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	SPATC1	Q76KD6	591 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	FAM35A	Q86V20	835 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	SPPL2C	Q8IUH8	684 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	TCTE3	Q8IZS6	198 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	CARNMT1	Q8N4J0	409 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	TRPV1	Q8NER1	839 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	OR10T2	Q8NGX3	314 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	PCDH19	Q8TAB3	1148 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	FAM110B	Q8TC76	370 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.63	□□□□□ -0.71	8e-7	■■■□□ 15.5
CHD2-223	ENST00000636306	SMARCD1	Q96GM5	515 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	DMRTB1	Q96MA1	342 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	PHOX2B	Q99453	314 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	TTYH2	Q9BSA4	534 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	ALOXE3	Q9BYJ1	711 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	CXCL16	Q9H2A7	254 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	FARSB	Q9NSD9	589 aa	Known RBP	10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	TAS2R9	Q9NYW1	312 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	MAT2B	Q9NZL9	334 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	NOD1	Q9Y239	953 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	TRAPPC4	Q9Y296	219 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	NDUFAF1	Q9Y375	327 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	PEX16	Q9Y5Y5	336 aa		10.63	□□□□□ -0.71
CHD2-223	ENST00000636306	TCRBV5S2	A0A599	114 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ZBBX	A8MT70	800 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF623	O75123	536 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	TRIM3	O75382	744 aa	Predicted RBP	10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	F9	P00740	461 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	APRT	P07741	180 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ICAM2	P13598	275 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ALOX12	P18054	663 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	LMO2	P25791	158 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	ARSF	P54793	590 aa		10.62	□□□□□ -0.71
CHD2-223	ENST00000636306	VBP1	P61758	197 aa		10.62	□□□□□ -0.71

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