RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 LSMEM2Q8N112 164 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 PELI3Q8N2H9 469 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 BBS5Q8N3I7 341 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 AGR3Q8TD06 166 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 ATXN7L3BQ96GX2 97 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 SCYL1Q96KG9 808 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 COQ10BQ9H8M1 238 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 CAB39LQ9H9S4 337 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 PLGRKTQ9HBL7 147 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 POLMQ9NP87 494 aaPredicted RBP15.31■□□□□ 0.04
CLN8-209ENST00000635970 PRSS16Q9NQE7 514 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 ADA2Q9NZK5 511 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 FBXO4Q9UKT5 387 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 SLC39A10Q9ULF5 831 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 ACOT9Q9Y305 439 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 RNF11Q9Y3C5 154 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 PCDHGA7Q9Y5G6 932 aa15.31■□□□□ 0.04
CLN8-209ENST00000635970 TRIM64CA6NLI5 447 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 F5H423 210 aaPredicted RBP15.3■□□□□ 0.04
CLN8-209ENST00000635970 APBB3O95704 486 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 SBK3P0C264 359 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 SP9P0CG40 484 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 NDUFV2P19404 249 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 PCSK6P29122 969 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 TTKP33981 857 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 NNMTP40261 264 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 FNTBP49356 437 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 NUBP1P53384 320 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 CDH17Q12864 832 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 GK3PQ14409 553 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 PRPSAP1Q14558 356 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 USP10Q14694 798 aaKnown RBP15.3■□□□□ 0.04
CLN8-209ENST00000635970 KCTD21Q4G0X4 260 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 SAMD4BQ5PRF9 694 aaKnown RBP15.3■□□□□ 0.04
CLN8-209ENST00000635970 RETSATQ6NUM9 610 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 LPCAT2Q7L5N7 544 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 LZTR1Q8N653 840 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 ANKFN1Q8N957 763 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 KDM1BQ8NB78 822 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 GOLM1Q8NBJ4 401 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 FNDC8Q8TC99 324 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 KIFC1Q9BW19 673 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 TNKS2Q9H2K2 1166 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 PDFQ9HBH1 243 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 EML4Q9HC35 981 aaKnown RBP15.3■□□□□ 0.04
CLN8-209ENST00000635970 SPAG4Q9NPE6 437 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 CD93Q9NPY3 652 aa15.3■□□□□ 0.04
CLN8-209ENST00000635970 IARS2Q9NSE4 1012 aaKnown RBP15.3■□□□□ 0.04
CLN8-209ENST00000635970 A0A087WXM4 84 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 C7orf72A4D263 438 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 TK2O00142 265 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 ZSCAN9O15535 394 aaPredicted RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 MAGEA8P43361 318 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 GALNT1Q10472 559 aaPredicted RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 PDAP1Q13442 181 aaKnown RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 CAMK2GQ13555 558 aaPredicted RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 LRP8Q14114 963 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 GRM3Q14832 879 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 C9orf64Q5T6V5 341 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 LRRC8EQ6NSJ5 796 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 FAM45BPQ6NSW5 357 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 PPP4R4Q6NUP7 873 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 C22orf39Q6P5X5 142 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 ZNF554Q86TJ5 538 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 CNTN4Q8IWV2 1026 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 FSTL5Q8N475 847 aaPredicted RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 CAMKK1Q8N5S9 505 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 FAM45AQ8TCE6 357 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 ATP6V1E2Q96A05 226 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 HDAC11Q96DB2 347 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 MFSD3Q96ES6 412 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 MRGPRX1Q96LB2 322 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 TMEM79Q9BSE2 394 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 ARMC1Q9NVT9 282 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 ANKRD36A6QL64 1941 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 MUC6Q6W4X9 2439 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 A0A087X1B8 175 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 ZNF821O75541 412 aaPredicted RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 C7P10643 843 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 BMP2P12643 396 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 ZBTB17Q13105 803 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 CYTH1Q15438 398 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 KLHDC8BQ8IXV7 354 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 PGBD3Q8N328 593 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 TNIP2Q8NFZ5 429 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 NPAS2Q99743 824 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 MRPL57Q9BQC6 102 aaKnown RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 TM6SF2Q9BZW4 377 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 MRPL46Q9H2W6 279 aaKnown RBP15.29■□□□□ 0.04
CLN8-209ENST00000635970 SP110Q9HB58 689 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 OLAHQ9NV23 265 aa15.29■□□□□ 0.04
CLN8-209ENST00000635970 FRYLO94915 3013 aa15.28■□□□□ 0.04
CLN8-209ENST00000635970 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
CLN8-209ENST00000635970 EDDM13A0A1B0GTR0 161 aa15.28■□□□□ 0.04
CLN8-209ENST00000635970 SH3PXD2BA1X283 911 aa15.28■□□□□ 0.04
CLN8-209ENST00000635970 SDHDO14521 159 aa15.28■□□□□ 0.04
CLN8-209ENST00000635970 DLX3O60479 287 aa15.28■□□□□ 0.04
CLN8-209ENST00000635970 PRAMEF11O60813 436 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms