RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZDBF2Q9HCK1 2354 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 TECTAO75443 2155 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 PLXNA3P51805 1871 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 DENND4AQ7Z401 1863 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 DOCK5Q9H7D0 1870 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ZFHX2Q9C0A1 2572 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 NOTCH2Q04721 2471 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 FRMPD4Q14CM0 1322 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 A0A1W2PQ09 198 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 A0A1W2PRQ8 180 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CXorf65A6NEN9 183 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CDRT15L2A8MXV6 281 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 FAM157AC9JC47 383 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 F5H6K3 240 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 EBAG9O00559 213 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SH2B2O14492 632 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 INPPL1O15357 1258 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 GPAA1O43292 621 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 GRID2O43424 1007 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CABYRO75952 493 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 NEURL1O76050 574 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CSPG5O95196 566 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 IPO7O95373 1038 aaKnown RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 NFATC1O95644 943 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CXCL10P02778 98 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 TFP02787 698 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 ICAM1P05362 532 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SLC2A4P14672 509 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 MCM3P25205 808 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 YWHAQP27348 245 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 GCH1P30793 250 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CDAP32320 146 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 EIF2DP41214 584 aaKnown RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 ME1P48163 572 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CENPAP49450 140 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 STAT2P52630 851 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SLC12A2P55011 1212 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CDH8P55286 799 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 HDAC4P56524 1084 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 HSF1Q00613 529 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 KLRC3Q07444 240 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 FRG1Q14331 258 aaKnown RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 VEPH1Q14D04 833 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SHBQ15464 509 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 TCTN1Q2MV58 587 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SYTL3Q4VX76 610 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SPECC1Q5M775 1068 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 GKAP1Q5VSY0 366 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 GPR139Q6DWJ6 353 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 HMBOX1Q6NT76 420 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 RPUSD3Q6P087 351 aaKnown RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 CPLX2Q6PUV4 134 aaKnown RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 TSSK4Q6SA08 328 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 CXCL17Q6UXB2 119 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 LRIG3Q6UXM1 1119 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 FAM83HQ6ZRV2 1179 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 CHST9Q7L1S5 443 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 IGFN1Q86VF2 1251 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 FBXO16Q8IX29 292 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 OR4N2Q8NGD1 307 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 ASB5Q8WWX0 329 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SGCDQ92629 289 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 KAT2AQ92830 837 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 FRAT1Q92837 279 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 GTF3C6Q969F1 213 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 MMABQ96EY8 250 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 C1orf74Q96LT6 269 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 GLT1D1Q96MS3 346 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 BAG1Q99933 345 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 ACTR5Q9H9F9 607 aaPredicted RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 ZNF304Q9HCX3 659 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 PDE7BQ9NP56 450 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 DLGAP2Q9P1A6 1054 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 ABI3Q9P2A4 366 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 GIMAP2Q9UG22 337 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 IPO11Q9UI26 975 aaKnown RBP2.53□□□□□ -2
SMARCB1-208ENST00000634926 SLC8A2Q9UPR5 921 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 MTMR6Q9Y217 621 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SESN1Q9Y6P5 492 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 SLC4A4Q9Y6R1 1079 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 DMXL2Q8TDJ6 3036 aa2.53□□□□□ -2
SMARCB1-208ENST00000634926 PLXNA4Q9HCM2 1894 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 TTC41PQ6P2S7 1318 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 WDR19Q8NEZ3 1342 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 USP24Q9UPU5 2620 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 TRBV5-7A0A0A0MS05 114 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC22A23A1A5C7 686 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 NPIPB11E5RHQ5 1161 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 H7C0S8 307 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 HAS3O00219 553 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 MPHOSPH10O00566 681 aaKnown RBP2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 SEC14L5O43304 696 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 CNOT3O75175 753 aaKnown RBP2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 RNF8O76064 485 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 WNT1P04628 370 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 CA3P07451 260 aa2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 ZFYP08048 801 aaPredicted RBP2.52□□□□□ -2.01
SMARCB1-208ENST00000634926 NGFRP08138 427 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms