RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 USP29Q9HBJ7 922 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 BARX1Q9HBU1 254 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-213ENST00000630925 CHST7Q9NS84 486 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 RRP7BPQ9NSQ0 103 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 ALKBH4Q9NXW9 302 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 BTBD7Q9P203 1132 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 DCDC2Q9UHG0 476 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 DSEQ9UL01 958 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 SATB2Q9UPW6 733 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 WASF3Q9UPY6 502 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 ZHX2Q9Y6X8 837 aa4.81□□□□□ -1.64
SDCBP-213ENST00000630925 ROCK1Q13464 1354 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PXDNQ92626 1479 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 XRN1Q8IZH2 1706 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ARHGAP31Q2M1Z3 1444 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 A0A1W2PR77 199 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ANKRD61A6NGH8 418 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 DBX1A6NMT0 343 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 H7C4K7 107 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ANKRD28O15084 1053 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 DCXO43602 365 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 NDUFS6O75380 124 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 DNAJB5O75953 348 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CPB1P15086 417 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CDC25BP30305 580 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CAMPP49913 170 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PER3P56645 1201 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 NCBP1Q09161 790 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 SPEM2Q0P670 501 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 TP53BP2Q13625 1128 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ENPP2Q13822 863 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 HKDC1Q2TB90 917 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 HSDL1Q3SXM5 330 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PAGE2BQ5JRK9 111 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 SPANXN2Q5MJ10 180 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 C6orf163Q5TEZ5 329 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CDKAL1Q5VV42 579 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CARD17Q5XLA6 110 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ABLIM2Q6H8Q1 611 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CDPF1Q6NVV7 123 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 TRMT11Q7Z4G4 463 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 C1orf210Q8IVY1 113 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 SIAH3Q8IW03 269 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 OR8J2Q8NGG1 315 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PSPC1Q8WXF1 523 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ASB15Q8WXK1 588 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 RRNAD1Q96FB5 475 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 LRIG1Q96JA1 1093 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 MAGED4Q96JG8 741 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 LRRC37BQ96QE4 947 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 EGFL8Q99944 293 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CCM2Q9BSQ5 444 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 SPATA16Q9BXB7 569 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 RNF208Q9H0X6 261 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 BLZF1Q9H2G9 400 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 UBQLN3Q9H347 655 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 FBXO44Q9H4M3 255 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 RUBCNLQ9H714 662 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PPANQ9NQ55 473 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 LIN7CQ9NUP9 197 aaKnown RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 KCMF1Q9P0J7 381 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ERVK-18Q9QC07 812 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 MGAT4CQ9UBM8 478 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 HSPB7Q9UBY9 170 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 SLC7A8Q9UHI5 535 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 CD207Q9UJ71 328 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 ZDHHC8Q9ULC8 765 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 STAP1Q9ULZ2 295 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PLAGL1Q9UM63 463 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 NCKAP1Q9Y2A7 1128 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 PADI2Q9Y2J8 665 aa4.8□□□□□ -1.64
SDCBP-213ENST00000630925 TIMM13Q9Y5L4 95 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-213ENST00000630925 EHBP1L1Q8N3D4 1523 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TEX13CA0A0J9YWL9 993 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 NPHP3-ACAD11A0A0J9YXS1 232 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 A0A1B0GVM2 712 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 C22orf46C9J442 243 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 KBTBD13C9JR72 458 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 HAS3O00219 553 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 FPGTO14772 594 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PLRG1O43660 514 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GAS2O43903 313 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SELENOFO60613 162 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 UFL1O94874 794 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 RLN1P04808 185 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PGK2P07205 417 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 MYZAPP0CAP1 466 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 STAG3L2P0CL84 134 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 IDO1P14902 403 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 NAGAP17050 411 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 NCF2P19878 526 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 IL32P24001 234 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 UCP1P25874 307 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 MSNP26038 577 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PON1P27169 355 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PKLRP30613 574 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GPR15P49685 360 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 HTR6P50406 440 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CLCN5P51795 746 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms