RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ADGRE3Q9BY15 652 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 TLR9Q9NR96 1032 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 GKN1Q9NS71 199 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 EVLQ9UI08 416 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 MAGEL2Q9UJ55 1249 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 VWA8A3KMH1 1905 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 UPK1AO00322 258 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 OR7A17O14581 309 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 LSM1O15116 133 aaKnown RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 CLDN11O75508 207 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 KLKB1P03952 638 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ELNP15502 786 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 NFKBIAP25963 317 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ELK4P28324 431 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ZNF177Q13360 481 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 TRAF7Q6Q0C0 670 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ITIH5Q86UX2 942 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 EGFL6Q8IUX8 553 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 TTC30BQ8N4P2 665 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ITFG1Q8TB96 612 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 GFM2Q969S9 779 aaKnown RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 TMBIM1Q969X1 311 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 NUDT4Q9NZJ9 180 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ZMYM5Q9UJ78 669 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 PCDHGA11Q9Y5H2 935 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 A0A1W2PPW3 197 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ILVBLA1L0T0 632 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 PRAMEF12O95522 483 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ESR1P03372 595 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 TCF3P15923 654 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ITGB6P18564 788 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 CD9P21926 228 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 PTGER3P43115 390 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ARSFP54793 590 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 TWF1Q12792 350 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 MTA1Q13330 715 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 GTF2H2Q13888 395 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 C16orf72Q14CZ0 275 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 CCNYL2Q5T2Q4 361 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 RNF219Q5W0B1 726 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 GTF2H2CQ6P1K8 395 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ABI1Q8IZP0 508 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 MARCH5Q9NX47 278 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 IFT80Q9P2H3 777 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 ST14Q9Y5Y6 855 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 HTTP42858 3142 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 ANKRD28O15084 1053 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 AOC2O75106 756 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 GUCA1CO95843 209 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 EEF1B2P24534 225 aaKnown RBP11.09□□□□□ -0.63
VARS2-213ENST00000625423 DCKP27707 260 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 POLR2IP36954 125 aaKnown RBP11.09□□□□□ -0.63
VARS2-213ENST00000625423 AARS2Q5JTZ9 985 aaKnown RBP11.09□□□□□ -0.63
VARS2-213ENST00000625423 PRSS55Q6UWB4 352 aaPredicted RBP11.09□□□□□ -0.63
VARS2-213ENST00000625423 TAS1R1Q7RTX1 841 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 P2RY12Q9H244 342 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 PLGRKTQ9HBL7 147 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 IRAK4Q9NWZ3 460 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 ARNTLO00327 626 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 DFNA5O60443 496 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 ALDH2P05091 517 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 ANXA6P08133 673 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 IRF1P10914 325 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 CORO1AP31146 461 aaKnown RBP11.09□□□□□ -0.63
VARS2-213ENST00000625423 SHMT2P34897 504 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 PIK3CGP48736 1102 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 HLCSP50747 726 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 ARF5P84085 180 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 PRKCZQ05513 592 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 PCBP2Q15366 365 aaKnown RBP eCLIP11.09□□□□□ -0.636e-9■■■■■ 34.9
VARS2-213ENST00000625423 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 FUT10Q6P4F1 479 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 ELMSAN1Q6PJG2 1045 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 SBSNQ6UWP8 590 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 STK32CQ86UX6 486 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 CLEC4FQ8N1N0 589 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 FAM86B1Q8N7N1 296 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 FIG4Q92562 907 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 EID2BQ96D98 161 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 THAP11Q96EK4 314 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 C17orf80Q9BSJ5 609 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 IPPKQ9H8X2 491 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 VAPAQ9P0L0 249 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 CDH7Q9ULB5 785 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 DHRS7Q9Y394 339 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 NEUROG3Q9Y4Z2 214 aa11.09□□□□□ -0.63
VARS2-213ENST00000625423 DYTNA2CJ06 578 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 H0YAE9 185 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 COCHO43405 550 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 TULP3O75386 442 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 DEAF1O75398 565 aaPredicted RBP11.08□□□□□ -0.64
VARS2-213ENST00000625423 CD160O95971 181 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 RAP2AP10114 183 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
VARS2-213ENST00000625423 SLC2A4P14672 509 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 CTPS1P17812 591 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 GGT1P19440 569 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 HMOX2P30519 316 aa11.08□□□□□ -0.64
VARS2-213ENST00000625423 TTKP33981 857 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms