RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SETD6Q8TBK2 473 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 UTP15Q8TED0 518 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 PTERQ96BW5 349 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 MASTLQ96GX5 879 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 C12orf57Q99622 126 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 CCDC32Q9BV29 185 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 REPIN1Q9BWE0 567 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 SPATA9Q9BWV2 254 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ZBTB20Q9HC78 741 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 FAM49BQ9NUQ9 324 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 FAM118AQ9NWS6 357 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 OXSMQ9NWU1 459 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 GTSE1Q9NYZ3 720 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 FNIP2Q9P278 1114 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ERVK-18Q9QC07 812 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ADGRE2Q9UHX3 823 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TPRKBQ9Y3C4 175 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 A0A096LPK6 155 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 CLRN2A0PK11 232 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 C3orf70A6NLC5 250 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 NME4O00746 187 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 XPNPEP2O43895 674 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 AIREO43918 545 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 FADS2O95864 444 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 C2P06681 752 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ADRB2P07550 413 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 G0S2P27469 103 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 RPL35P42766 123 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 LIMK1P53667 647 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 OGDHQ02218 1023 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 BAMBIQ13145 260 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TNK1Q13470 666 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 SNRNP35Q16560 246 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 DDR2Q16832 855 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 HACD2Q6Y1H2 254 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ANKS3Q6ZW76 656 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 FAM35AQ86V20 835 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 OR8K5Q8NH50 307 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ASB12Q8WXK4 309 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ST8SIA4Q92187 359 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.82□□□□□ -1.16
VPS11-209ENST00000622309 FAM149B1Q96BN6 582 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ROPN1LQ96C74 230 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TRNT1Q96Q11 434 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 MMP28Q9H239 520 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 SMOC2Q9H3U7 446 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 PCDHB16Q9NRJ7 776 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TMEM39AQ9NV64 488 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 SCN3BQ9NY72 215 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 USE1Q9NZ43 259 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 HECAQ9UBI9 543 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 SLC23A1Q9UHI7 598 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 CYB5R1Q9UHQ9 305 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 COQ4Q9Y3A0 265 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 PCDHGB2Q9Y5G2 931 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 HRH3Q9Y5N1 445 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TTC24A2A3L6 582 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 WDR27A2RRH5 827 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 PPP1R11O60927 126 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 PTP4A3O75365 173 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 NDUFS6O75380 124 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 UGT2B17O75795 530 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 CNTN5O94779 1100 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 NDUFB10O96000 172 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 RETP07949 1114 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 UMPSP11172 480 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ACADMP11310 421 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 UGT2B15P54855 530 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 IL5RAQ01344 420 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 RGS1Q08116 209 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 SEMA3BQ13214 749 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TRIP4Q15650 581 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 CTU2Q2VPK5 515 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 FAM26DQ5JW98 314 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TMEM270Q6UE05 265 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 ZDHHC13Q8IUH4 622 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TCTE3Q8IZS6 198 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 PLD5Q8N7P1 536 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 MCUQ8NE86 351 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TRMT2BQ96GJ1 504 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 HOPXQ9BPY8 73 aaPredicted RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 OR51B5Q9H339 312 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 FAM83DQ9H4H8 585 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 SP110Q9HB58 689 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 TLR9Q9NR96 1032 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 INTS7Q9NVH2 962 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 PCOLCE2Q9UKZ9 415 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 LYVE1Q9Y5Y7 322 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 A3GALT2U3KPV4 340 aa7.82□□□□□ -1.16
VPS11-209ENST00000622309 DDX60LQ5H9U9 1706 aaKnown RBP7.82□□□□□ -1.16
VPS11-209ENST00000622309 ADAMTSL1Q8N6G6 1762 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 HNRNPCL2B2RXH8 293 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 DDX39AO00148 427 aaKnown RBP7.81□□□□□ -1.16
VPS11-209ENST00000622309 DFFAO00273 331 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 SDHDO14521 159 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 SSX5O60225 188 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 ADAM11O75078 769 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 ANGPTL1O95841 491 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 EDN3P14138 238 aa7.81□□□□□ -1.16
VPS11-209ENST00000622309 ZNF30P17039 623 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms