RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZNF8P17098 575 aaPredicted RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 XRCC1P18887 633 aaPredicted RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 CES1P23141 567 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 RPL10P27635 214 aaKnown RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 CAPZBP47756 277 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 MRPS25P82663 173 aaKnown RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 SLC7A5Q01650 507 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 TUBB3Q13509 450 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 KRT81Q14533 505 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 ASIC2Q16515 512 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 PLA2G4EQ3MJ16 856 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLK1-215ENST00000621181 NADK2Q4G0N4 442 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 ALS2CLQ60I27 953 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 TIGD7Q6NT04 549 aaPredicted RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 FAM92BQ6ZTR7 304 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 MREGQ8N565 214 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 TEX26Q8N6G2 289 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 CT55Q8WUE5 264 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 THAP4Q8WY91 577 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 RSC1A1Q92681 617 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 KCTD12Q96CX2 325 aaKnown RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 ZDHHC12Q96GR4 267 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 LYSMD1Q96S90 227 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 SYT11Q9BT88 431 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 SPATA16Q9BXB7 569 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 BRD8Q9H0E9 1235 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 ACSS2Q9NR19 701 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 POT1Q9NUX5 634 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 FEZ2Q9UHY8 353 aaPredicted RBP7.69□□□□□ -1.18
CLK1-215ENST00000621181 MED13Q9UHV7 2174 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 SHANK1Q9Y566 2161 aa7.69□□□□□ -1.18
CLK1-215ENST00000621181 GPR89AB7ZAQ6 455 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 MFSD11O43934 449 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 TIAF1O95411 115 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 PRLP01236 227 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 SLC4A1P02730 911 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 GPR89BP0CG08 455 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 FGF5P12034 268 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 SLC19A1P41440 591 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 RPL26P61254 145 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 RPS15P62841 145 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 KLHL30Q0D2K2 578 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 CHAF1BQ13112 559 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ZNF648Q5T619 568 aaPredicted RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 ALG1LQ6GMV1 187 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 CCDC70Q6NSX1 233 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 PRSS42Q7Z5A4 293 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 RNF166Q96A37 237 aaPredicted RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 CXorf40BQ96DE9 158 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 TRIM11Q96F44 468 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 MLPHQ9BV36 600 aaPredicted RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 GPR87Q9BY21 358 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ING2Q9H160 280 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 PCDH18Q9HCL0 1135 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 SLC40A1Q9NP59 571 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 CASS4Q9NQ75 786 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 RBM22Q9NW64 420 aaKnown RBP eCLIP7.68□□□□□ -1.182e-10■■■■■ 39.5
CLK1-215ENST00000621181 SCHIP1Q9P0W5 487 aaPredicted RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 RARRES3Q9UL19 164 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 RPL26L1Q9UNX3 145 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 BZW2Q9Y6E2 419 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 TEP1Q99973 2627 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 RGSL1A5PLK6 1076 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 OR52A4PA6NMU1 304 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ANKRD66B4E2M5 251 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 KMOO15229 486 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 MATN3O15232 486 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 FTCDO95954 541 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 RNF224P0DH78 156 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 MYBL1P10243 752 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 GZMAP12544 262 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 NELFEP18615 380 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 PTPN4P29074 926 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ECHS1P30084 290 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 PAFAH1B1P43034 410 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 SSR1P43307 286 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 CARSP49589 748 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 CCL11P51671 97 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 CLCNKAP51800 687 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 DRG2P55039 364 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 RPS18P62269 152 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 PDE1BQ01064 536 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 GPR18Q14330 331 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 PIGHQ14442 188 aaPredicted RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 IHHQ14623 411 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 KCNAB1Q14722 419 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 UGT8Q16880 541 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 EIF2S3LQ2VIR3 472 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 TTMPQ5BVD1 217 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 CPZQ66K79 652 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 TXNRD3NBQ6F5E7 133 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 PWWP2BQ6NUJ5 590 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 SYVN1Q86TM6 617 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 LRRTM4Q86VH4 590 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 EIF1ADQ8N9N8 165 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 SIDT2Q8NBJ9 832 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 PRR7Q8TB68 274 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 TEKT4Q8WW24 435 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms