RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 GLP2RO95838 553 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 FDX1P10109 184 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PRKAR2AP13861 404 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 FECHP22830 423 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TUBG1P23258 451 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ACOX1Q15067 660 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CDHR3Q6ZTQ4 885 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 LARGE2Q8N3Y3 721 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 YIPF7Q8N8F6 280 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TRPV3Q8NET8 790 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 OR8S1Q8NH09 359 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 JOSD2Q8TAC2 188 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SEZ6LQ9BYH1 1024 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 QRSL1Q9H0R6 528 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 HCN3Q9P1Z3 774 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TRPS1Q9UHF7 1281 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PLEKHA6Q9Y2H5 1048 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 KIF1BO60333 1816 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DISC1C4P0D8 188 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF254O75437 659 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GIMD1P0DJR0 217 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 RAB3BP20337 219 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 LCN1P31025 176 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ERVK-21P61565 698 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PSMD5Q16401 504 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 HYIQ5T013 277 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 LIPKQ5VXJ0 399 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TNFAIP8L1Q8WVP5 186 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 IPCEF1Q8WWN9 437 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TSNAXQ99598 290 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 KCNH4Q9UQ05 1017 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CLUHO75153 1309 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GRK4P32298 578 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PABPC1LQ4VXU2 614 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CLEC12AQ5QGZ9 265 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF549Q6P9A3 640 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ARMCX2Q7L311 632 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF438Q7Z4V0 828 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 MMAAQ8IVH4 418 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 FBXL16Q8N461 479 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DNAJA3Q96EY1 480 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 MICU1Q9BPX6 476 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TTTY10Q9BZA0 68 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 OR10A4Q9H209 315 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PIGUQ9H490 435 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DNAJB4Q9UDY4 337 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 BEST1O76090 585 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DHFRP00374 187 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 STOMP27105 288 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CDKN2CP42773 168 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 BTN3A2P78410 334 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ELP2Q6IA86 826 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 LIN54Q6MZP7 749 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GALNTL5Q7Z4T8 443 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CYP4Z1Q86W10 505 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 HS3ST5Q8IZT8 346 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 C3orf49Q96BT1 292 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CYP2S1Q96SQ9 504 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SNCAIPQ9Y6H5 919 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 A2ML1A8K2U0 1454 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ROBO2Q9HCK4 1378 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 MYPNQ86TC9 1320 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CD3EAPO15446 510 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TGFB1I1O43294 461 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM63AO94886 807 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 USP17L7P0C7H9 530 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 OLR1P78380 273 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TXNL4AP83876 142 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 NFIAQ12857 509 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 XKRXQ6PP77 449 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 RNF44Q7L0R7 432 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 VTCN1Q7Z7D3 282 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 OR5B17Q8NGF7 314 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 UPK3BL1B0FP48 263 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 UPK3BL2E5RIL1 263 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ALPIP09923 528 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 IDO1P14902 403 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 BCL2L1Q07817 233 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 FAM98CQ17RN3 349 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PAN3Q58A45 887 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PRAMEF18Q5VWM3 479 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DPPA2Q7Z7J5 298 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PHF10Q8WUB8 498 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 FKBP14Q9NWM8 211 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GPR83Q9NYM4 423 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 L7N2F9 121 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PRKAG1P54619 331 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CYB5R2Q6BCY4 276 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PIWIL4Q7Z3Z4 852 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 NANPQ8TBE9 248 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PTCD2Q8WV60 388 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SPATA33Q96N06 139 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SLC9A7Q96T83 725 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TDRD3Q9H7E2 651 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZBTB26Q9HCK0 441 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ACOX3O15254 700 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SURF1Q15526 300 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 FAM76BQ5HYJ3 339 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 METTL2BQ6P1Q9 378 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 LRCH3Q96II8 777 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms