RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SARDHQ9UL12 918 aa2.51□□□□□ -2.01
TARDBP-220ENST00000618606 TMEM184BQ9Y519 407 aaPredicted RBP2.51□□□□□ -2.01
TARDBP-220ENST00000618606 IGHV4-4A0A075B6R2 117 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 TNFSF14O43557 240 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 GPR137BO60478 399 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 BMP10O95393 424 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 ACADSP16219 412 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 IL7RP16871 459 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 CAPN3P20807 821 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 NFKBIAP25963 317 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 CEACAM8P31997 349 aaPredicted RBP2.5□□□□□ -2.01
TARDBP-220ENST00000618606 SLC6A12P48065 614 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 RXRGP48443 463 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 MMP15P51511 669 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 VAMP2P63027 116 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 TEAD2Q15562 447 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 GPR68Q15743 365 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 ZNF805Q5CZA5 627 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 NDUFAF5Q5TEU4 345 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 GSTA5Q7RTV2 222 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 RASGEF1CQ8N431 466 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 FBXL16Q8N461 479 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 LINC00612Q8N6U2 182 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 UBE2Q2Q8WVN8 375 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 SMPDL3BQ92485 455 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 SLC47A1Q96FL8 570 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 SMC6Q96SB8 1091 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 SEC62Q99442 399 aaKnown RBP2.5□□□□□ -2.01
TARDBP-220ENST00000618606 SYT15Q9BQS2 421 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 PELI2Q9HAT8 420 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 TP53TG3Q9ULZ0 132 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 TBX20Q9UMR3 447 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 CLIC4Q9Y696 253 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 CAPN7Q9Y6W3 813 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 ARHGEF40Q8TER5 1519 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 ATRXP46100 2492 aa2.5□□□□□ -2.01
TARDBP-220ENST00000618606 A0A1W2PRG0 241 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 A6NCN8 305 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 A6NLC8 198 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 PI15O43692 258 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 TRMUO75648 421 aaKnown RBP2.49□□□□□ -2.01
TARDBP-220ENST00000618606 NKX2-2O95096 273 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 KCNK5O95279 499 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 TBX18O95935 607 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 SELLP14151 372 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 CASP2P42575 452 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 PRCPP42785 496 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 NEXNQ0ZGT2 675 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 GALNT2Q10471 571 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 KCTD2Q14681 263 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 PNLIPRP3Q17RR3 467 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 GLIPR1L2Q4G1C9 344 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 ISCA2Q86U28 154 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 LMNTD2Q8IXW0 634 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 TMTC2Q8N394 836 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 C1orf52Q8N6N3 182 aaKnown RBP2.49□□□□□ -2.01
TARDBP-220ENST00000618606 TMEM143Q96AN5 459 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 SAAL1Q96ER3 474 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 NR1H4Q96RI1 486 aaPredicted RBP2.49□□□□□ -2.01
TARDBP-220ENST00000618606 UBN1Q9NPG3 1134 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 BLOC1S4Q9NUP1 217 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 CNOT8Q9UFF9 292 aaKnown RBP2.49□□□□□ -2.01
TARDBP-220ENST00000618606 RABGAP1Q9Y3P9 1069 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 MAU2Q9Y6X3 613 aa2.49□□□□□ -2.01
TARDBP-220ENST00000618606 IGLV9-49A0A0B4J1Y8 123 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 IGHV4-61A0A0C4DH41 118 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 KANSL1LA0AUZ9 987 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 ATP2A1O14983 1001 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 IGHV4-59P01825 116 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 ICAM1P05362 532 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 HNRNPA1P09651 372 aaKnown RBP eCLIP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 KRTAP1-4P0C5Y4 121 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 EIF3BP55884 814 aaKnown RBP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 SP3Q02447 781 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 MFAP5Q13361 173 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 SOWAHCQ53LP3 525 aaPredicted RBP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 FAM69AQ5T7M9 428 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 CCDC30Q5VVM6 783 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 FAAH2Q6GMR7 532 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 CFAP161Q6P656 301 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 TSSK4Q6SA08 328 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 C16orf54Q6UWD8 224 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 FASTKD5Q7L8L6 764 aaKnown RBP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 PPP4R1Q8TF05 950 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 HTRA1Q92743 480 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 HVCN1Q96D96 273 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 RRP36Q96EU6 259 aaKnown RBP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 EGLN2Q96KS0 407 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 GFI1Q99684 422 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 BARD1Q99728 777 aaKnown RBP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 STRA6Q9BX79 667 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 WASH6PQ9NQA3 447 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 MTMR10Q9NXD2 777 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 RNF186Q9NXI6 227 aa2.48□□□□□ -2.01
TARDBP-220ENST00000618606 RCC2Q9P258 522 aaKnown RBP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 FBXO2Q9UK22 296 aaPredicted RBP2.48□□□□□ -2.01
TARDBP-220ENST00000618606 KDM3AQ9Y4C1 1321 aa2.47□□□□□ -2.01
TARDBP-220ENST00000618606 OR2M5A3KFT3 312 aa2.47□□□□□ -2.01
TARDBP-220ENST00000618606 B4E171 279 aa2.47□□□□□ -2.01
TARDBP-220ENST00000618606 HOXC11O43248 304 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms