RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ZDHHC11BP0C7U3 371 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 POLR2IP36954 125 aaKnown RBP11.63□□□□□ -0.55
C11orf54-215ENST00000617482 MRPL19P49406 292 aaKnown RBP11.63□□□□□ -0.55
C11orf54-215ENST00000617482 KPNA1P52294 538 aaPredicted RBP11.63□□□□□ -0.55
C11orf54-215ENST00000617482 ADARB1P78563 741 aaKnown RBP11.63□□□□□ -0.55
C11orf54-215ENST00000617482 TWF1Q12792 350 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 TRAF2Q12933 501 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 GPR17Q13304 367 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 RTP2Q5QGT7 225 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 ACBD5Q5T8D3 534 aaPredicted RBP11.63□□□□□ -0.55
C11orf54-215ENST00000617482 STK32CQ86UX6 486 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 RIMKLAQ8IXN7 391 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 CLEC4FQ8N1N0 589 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 ITFG1Q8TB96 612 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 BPIFB1Q8TDL5 484 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 TMBIM1Q969X1 311 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 THAP11Q96EK4 314 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 CGREF1Q99674 301 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 ADGRE3Q9BY15 652 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 LTB4R2Q9NPC1 389 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 C8orf4Q9NR00 106 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 IFT80Q9P2H3 777 aaPredicted RBP11.63□□□□□ -0.55
C11orf54-215ENST00000617482 CIDEBQ9UHD4 219 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 PCDHGA11Q9Y5H2 935 aa11.63□□□□□ -0.55
C11orf54-215ENST00000617482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 SLC38A8A6NNN8 435 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 OR7A17O14581 309 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 LSM1O15116 133 aaKnown RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 IRF1P10914 325 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 CDH1P12830 882 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 SLC2A4P14672 509 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 CTPS1P17812 591 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ATF6P18850 670 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 CLCN7P51798 805 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 IST1P53990 364 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ARSFP54793 590 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ZNF177Q13360 481 aaPredicted RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 RNF219Q5W0B1 726 aaPredicted RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 CCSAPQ6IQ19 270 aaPredicted RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ELMSAN1Q6PJG2 1045 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 PRSS55Q6UWB4 352 aaPredicted RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 USP51Q70EK9 711 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 TAS1R1Q7RTX1 841 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 GOLGA7Q7Z5G4 137 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ZBTB46Q86UZ6 589 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ABI1Q8IZP0 508 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 FAM86B1Q8N7N1 296 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 FIG4Q92562 907 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 SPATA17Q96L03 361 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 C17orf80Q9BSJ5 609 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 IPPKQ9H8X2 491 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ZNF639Q9UID6 485 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 PCDHB3Q9Y5E6 796 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 GREB1Q4ZG55 1949 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 UPK1AO00322 258 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 FFAR3O14843 346 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 GPR42O15529 346 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 DFNA5O60443 496 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 NPPAP01160 153 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ALDH2P05091 517 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 CD247P20963 164 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 GGT5P36269 586 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 GDF5P43026 501 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 HSPA7P48741 367 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 PLXNA3P51805 1871 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 FAM189BP81408 668 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 GTF2H2Q13888 395 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ANKDD1AQ495B1 522 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 C5orf22Q49AR2 442 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 AARS2Q5JTZ9 985 aaKnown RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 CCNYL2Q5T2Q4 361 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 GTF2H2CQ6P1K8 395 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 DHRS4L2Q6PKH6 230 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 DPP10Q8N608 796 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 FBXO30Q8TB52 745 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 MIPOL1Q8TD10 442 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 SNRNP27Q8WVK2 155 aaKnown RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ING2Q9H160 280 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 NSUN3Q9H649 340 aaKnown RBP11.62□□□□□ -0.55
C11orf54-215ENST00000617482 PLGRKTQ9HBL7 147 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 HEBP1Q9NRV9 189 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 MAGEL2Q9UJ55 1249 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 PCDHB9Q9Y5E1 797 aa11.62□□□□□ -0.55
C11orf54-215ENST00000617482 ZNF701M0R085 212 aaPredicted RBP11.61□□□□□ -0.55
C11orf54-215ENST00000617482 CLDN11O75508 207 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 ESR1P03372 595 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 BMP1P13497 986 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 ELNP15502 786 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 CORO1AP31146 461 aaKnown RBP11.61□□□□□ -0.55
C11orf54-215ENST00000617482 SHMT2P34897 504 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 MTHFRP42898 656 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 PTGER3P43115 390 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 CLCN4P51793 760 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 NAA20P61599 178 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 CAP1Q01518 475 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 PTGR1Q14914 329 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 FAM98BQ52LJ0 330 aaKnown RBP11.61□□□□□ -0.55
C11orf54-215ENST00000617482 SGO1Q5FBB7 561 aa11.61□□□□□ -0.55
C11orf54-215ENST00000617482 XKR5Q6UX68 686 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms