RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 C6orf15Q6UXA7 325 aaPredicted RBP18.59■□□□□ 0.57
CDX1-202ENST00000616154 UBL4BQ8N7F7 174 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 RSC1A1Q92681 617 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 OR6C1Q96RD1 312 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 FERMT1Q9BQL6 677 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 EPHA6Q9UF33 1036 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 RSPH14Q9UHP6 348 aa18.59■□□□□ 0.57
CDX1-202ENST00000616154 OR52A4PA6NMU1 304 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 ANXA9O76027 345 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 FGF5P12034 268 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 VCLP18206 1134 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 F8A1P23610 371 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 ADRA1AP35348 466 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 CHRNA4P43681 627 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 DRG2P55039 364 aaKnown RBP18.58■□□□□ 0.57
CDX1-202ENST00000616154 TMEM115Q12893 351 aaPredicted RBP18.58■□□□□ 0.57
CDX1-202ENST00000616154 GTF2H3Q13889 308 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 GPR18Q14330 331 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 ATP1A1-AS1Q5TC04 95 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 ZDHHC20Q5W0Z9 365 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 C16orf46Q6P387 395 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 TRAPPC5Q8IUR0 188 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 TTC13Q8NBP0 860 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 BRSK1Q8TDC3 778 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 KLHL6Q8WZ60 621 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 CXorf40BQ96DE9 158 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 ZDHHC12Q96GR4 267 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 SPATA13Q96N96 652 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 ALS2CR12Q96Q35 445 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 RAB33BQ9H082 229 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 BPIFA1Q9NP55 256 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 ZNF71Q9NQZ8 489 aaPredicted RBP18.58■□□□□ 0.57
CDX1-202ENST00000616154 IL17CQ9P0M4 197 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 KCTD3Q9Y597 815 aa18.58■□□□□ 0.57
CDX1-202ENST00000616154 MRPS18BQ9Y676 258 aaKnown RBP18.58■□□□□ 0.57
CDX1-202ENST00000616154 ZNF500O60304 480 aaPredicted RBP18.57■□□□□ 0.56
CDX1-202ENST00000616154 KCNJ13O60928 360 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 RASSF9O75901 435 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 FTCDO95954 541 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 DLSTP36957 453 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 GEMP55040 296 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 ETF1P62495 437 aaKnown RBP18.57■□□□□ 0.56
CDX1-202ENST00000616154 SEPT6Q14141 434 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 COLEC12Q5KU26 742 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 ANKRD20A2Q5SQ80 823 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 ANKRD20A1Q5TYW2 823 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 ANKRD20A3Q5VUR7 823 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 RANBP10Q6VN20 620 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 RASGRP3Q8IV61 690 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 GALNT6Q8NCL4 622 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 IPMKQ8NFU5 416 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 ABHD17AQ96GS6 310 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 PPP1R2P1Q96PQ5 205 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 C10orf88Q9H8K7 445 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 CROTQ9UKG9 612 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 RELNP78509 3460 aa18.57■□□□□ 0.56
CDX1-202ENST00000616154 ESPNB1AK53 854 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 KIF1CO43896 1103 aaKnown RBP18.56■□□□□ 0.56
CDX1-202ENST00000616154 KIAA0754O94854 1291 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 HALP42357 657 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 FOXK1P85037 733 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 DMPKQ09013 629 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDX1-202ENST00000616154 LACTB2Q53H82 288 aaPredicted RBP18.56■□□□□ 0.56
CDX1-202ENST00000616154 MEI1Q5TIA1 1274 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 CACHD1Q5VU97 1274 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 CYB5D1Q6P9G0 228 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 SLC35F6Q8N357 371 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 GDAP1Q8TB36 358 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 SLC35B2Q8TB61 432 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 STAMBPL1Q96FJ0 436 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 C19orf43Q9BQ61 176 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 ZCCHC2Q9C0B9 1178 aaKnown RBP18.56■□□□□ 0.56
CDX1-202ENST00000616154 IL26Q9NPH9 171 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDX1-202ENST00000616154 SEMA5BQ9P283 1151 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 PACSIN2Q9UNF0 486 aaPredicted RBP18.56■□□□□ 0.56
CDX1-202ENST00000616154 WDR37Q9Y2I8 494 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 AAR2Q9Y312 384 aaKnown RBP18.56■□□□□ 0.56
CDX1-202ENST00000616154 PCDHB3Q9Y5E6 796 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 KCNMB2Q9Y691 235 aa18.56■□□□□ 0.56
CDX1-202ENST00000616154 SPENQ96T58 3664 aaKnown RBP18.56■□□□□ 0.56
CDX1-202ENST00000616154 C5orf60A6NFR6 353 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 FANCGO15287 622 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 KCNN4O15554 427 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 STK10O94804 968 aaKnown RBP18.55■□□□□ 0.56
CDX1-202ENST00000616154 TUBB4AP04350 444 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 NELFEP18615 380 aaKnown RBP18.55■□□□□ 0.56
CDX1-202ENST00000616154 MSNP26038 577 aaKnown RBP18.55■□□□□ 0.56
CDX1-202ENST00000616154 SPAM1P38567 509 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 TNNT3P45378 269 aaPredicted RBP18.55■□□□□ 0.56
CDX1-202ENST00000616154 MSLNQ13421 630 aaPredicted RBP18.55■□□□□ 0.56
CDX1-202ENST00000616154 IRGCQ6NXR0 463 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 FAM92BQ6ZTR7 304 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 RNF31Q96EP0 1072 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 ELMO2Q96JJ3 720 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 TTC25Q96NG3 672 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 FSD1LQ9BXM9 530 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 ARNT2Q9HBZ2 717 aa18.55■□□□□ 0.56
CDX1-202ENST00000616154 KCND3Q9UK17 655 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms