RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ZNF423Q2M1K9 1284 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 PLA2G4EQ3MJ16 856 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 TTLL9Q3SXZ7 439 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 CEP85LQ5SZL2 805 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 CFAP206Q8IYR0 622 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 SDR16C5Q8N3Y7 309 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 FSTL5Q8N475 847 aaPredicted RBP14.45□□□□□ -0.1
CD48-203ENST00000613788 INPP5DQ92835 1189 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 FAM136AQ96C01 138 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 GPR21Q99679 349 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 GSDMCQ9BYG8 508 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 TMEM168Q9H0V1 697 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 POPDC3Q9HBV1 291 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 TM7SF3Q9NS93 570 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 KLC4Q9NSK0 619 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 FAM86C1Q9NVL1 165 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 SLC23A2Q9UGH3 650 aa14.45□□□□□ -0.1
CD48-203ENST00000613788 SDK1Q7Z5N4 2213 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 HMX2A2RU54 273 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 TRIM49D1C9J1S8 452 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 YKT6O15498 198 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 CER1O95813 267 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 CRABP2P29373 138 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 TYK2P29597 1187 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 SERPINB8P50452 374 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 CLCN7P51798 805 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 CLCNKAP51800 687 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 RAB10P61026 200 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 IRX4P78413 519 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 CTBSQ01459 385 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 BOP1Q14137 746 aaKnown RBP14.44□□□□□ -0.1
CD48-203ENST00000613788 HLA-BQ31612 363 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 PRRT3Q5FWE3 981 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 PRAMEF14Q5SWL7 426 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 PLEKHS1Q5SXH7 462 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 TIFABQ6ZNK6 161 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 CCDC91Q7Z6B0 441 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 ZBTB2Q8N680 514 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 ACVR1CQ8NER5 493 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 LKAAEAR1Q8TD35 194 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 GPBAR1Q8TDU6 330 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 TMEM159Q96B96 161 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 PKNOX2Q96KN3 472 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 OLFM1Q99784 485 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 TCEAL2Q9H3H9 227 aaPredicted RBP14.44□□□□□ -0.1
CD48-203ENST00000613788 SYTL2Q9HCH5 934 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 EURLQ9NYK6 297 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 NCDNQ9UBB6 729 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 CTNNAL1Q9UBT7 734 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 LGALS13Q9UHV8 139 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 TLK1Q9UKI8 766 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 ACSL5Q9ULC5 683 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 DNAJC16Q9Y2G8 782 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 MED16Q9Y2X0 877 aa14.44□□□□□ -0.1
CD48-203ENST00000613788 GOLGA6L10A6NI86 522 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 SCAMP1O15126 338 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 ZNF806P0C7X5 589 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 KRT15P19012 456 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 IDSP22304 550 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 ATXN3P54252 364 aaPredicted RBP14.43□□□□□ -0.1
CD48-203ENST00000613788 TIAL1Q01085 375 aaKnown RBP eCLIP14.43□□□□□ -0.1
CD48-203ENST00000613788 HSPA14Q0VDF9 509 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 RPA4Q13156 261 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 CCDC6Q16204 474 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 METRNLQ641Q3 311 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 RAPH1Q70E73 1250 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 TAF8Q7Z7C8 310 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 SIDT2Q8NBJ9 832 aaKnown RBP14.43□□□□□ -0.1
CD48-203ENST00000613788 ACBD3Q9H3P7 528 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 OSGEPL1Q9H4B0 414 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 GAREM1Q9H706 876 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 COG4Q9H9E3 785 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 CAB39LQ9H9S4 337 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 GPAMQ9HCL2 828 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 GALPQ9UBC7 116 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 GULP1Q9UBP9 304 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 FAM8A1Q9UBU6 413 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 KCNK6Q9Y257 313 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 PLEKHM1Q9Y4G2 1056 aa14.43□□□□□ -0.1
CD48-203ENST00000613788 A0A1B0GTQ1 180 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 SLC5A10A0PJK1 596 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 EIF3FO00303 357 aaPredicted RBP14.42□□□□□ -0.1
CD48-203ENST00000613788 RGS16O15492 202 aaPredicted RBP14.42□□□□□ -0.1
CD48-203ENST00000613788 AQP9O43315 295 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 LRP3O75074 770 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 GPC4O75487 556 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 MT-ND3P03897 115 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 MPOP05164 745 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 MYZAPP0CAP1 466 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 CBSLP0DN79 551 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 DGKAP23743 735 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 CBSP35520 551 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 ACTR1BP42025 376 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 RGS4P49798 205 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 IL2P60568 153 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 ACTR1AP61163 376 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 NFE2L1Q14494 772 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 ZKSCAN8Q15776 578 aaPredicted RBP14.42□□□□□ -0.1
CD48-203ENST00000613788 ZNF658BQ4V348 819 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms