RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	UTP20	O75691	2785 aa	Known RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	OR5K3	A6NET4	321 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	MGAT4D	A6NG13	374 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	TLCD2	A6NGC4	264 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	MKRN2OS	H3BPM6	223 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	GPR39	O43194	453 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	TIAF1	O95411	115 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	FURIN	P09958	794 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	TNNT1	P13805	278 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	FOLR1	P15328	257 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	CA5A	P35218	305 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	PMS2	P54278	862 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	COPS2	P61201	443 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	PPP1CA	P62136	330 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	HSD11B2	P80365	405 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	ACY1	Q03154	408 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	KLRB1	Q12918	225 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	TUBB3	Q13509	450 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	DNASE1L3	Q13609	305 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	NFE2L1	Q14494	772 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	BCL7A	Q4VC05	210 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	PWWP2B	Q6NUJ5	590 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	TMEM220	Q6QAJ8	160 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	RANBP10	Q6VN20	620 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	PID1	Q7Z2X4	250 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZC3H18	Q86VM9	953 aa	Known RBP	10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	D2HGDH	Q8N465	521 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	SIDT2	Q8NBJ9	832 aa	Known RBP	10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	IPMK	Q8NFU5	416 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	OR2L2	Q8NH16	312 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	OR8K5	Q8NH50	307 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZNF398	Q8TD17	642 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	BLOC1S5	Q8TDH9	187 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	RBM41	Q96IZ5	413 aa	Known RBP	10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	LINC00615	Q96LM1	132 aa	Predicted RBP	10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	GBA3	Q9H227	469 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	LHX9	Q9NQ69	397 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	TRIM10	Q9UDY6	481 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	RARRES3	Q9UL19	164 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	EFR3B	Q9Y2G0	817 aa		10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
CBWD1-222	ENST00000613508	PIPSL	A2A3N6	862 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	C5orf60	A6NFR6	353 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	OR2AG2	A6NM03	316 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	C2orf81	A6NN90	581 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	APOC4-APOC2	K7ER74	178 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	STX7	O15400	261 aa	Known RBP	10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	SGTA	O43765	313 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	RFPL1	O75677	317 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	ANXA9	O76027	345 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	PRAMEF1	O95521	474 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	APOC2	P02655	101 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	LPO	P22079	712 aa	Predicted RBP	10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	ADRA1A	P35348	466 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	CD97	P48960	835 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	MARCKSL1	P49006	195 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	TUBB4B	P68371	445 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	LAMB3	Q13751	1172 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	TUBB2A	Q13885	445 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	ERV3-1	Q14264	604 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	TAF1A	Q15573	450 aa	Predicted RBP	10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	FNBP1L	Q5T0N5	605 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	KAZN	Q674X7	775 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	CT55	Q8WUE5	264 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	ELMO2	Q96JJ3	720 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	MAP3K3	Q99759	626 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	GORASP1	Q9BQQ3	440 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	TUBB2B	Q9BVA1	445 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	FSD1L	Q9BXM9	530 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	GOLPH3	Q9H4A6	298 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	ACTL8	Q9H568	366 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	KIR3DX1	Q9H7L2	352 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	LATS2	Q9NRM7	1088 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	FGF21	Q9NSA1	209 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	RSPH14	Q9UHP6	348 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	SLC24A2	Q9UI40	661 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	PSMD13	Q9UNM6	376 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	TP53TG5	Q9Y2B4	290 aa		10.87	□□□□□ -0.67
CBWD1-222	ENST00000613508	BUD23	O43709	281 aa	Known RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	KATNA1	O75449	491 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	SRP72	O76094	671 aa	Known RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZBTB11	O95625	1053 aa	Predicted RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	AGT	P01019	485 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	MSL3P1	P0C860	447 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	EBLN1	P0CF75	366 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	MSH3	P20585	1137 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	PTPN4	P29074	926 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	PTPN7	P35236	360 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	MAGEA1	P43355	309 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	GEM	P55040	296 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	PDE1B	Q01064	536 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	MSLN	Q13421	630 aa	Predicted RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	UBAP2L	Q14157	1087 aa	Known RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	KCNAB1	Q14722	419 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	PLCL1	Q15111	1095 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	LLGL1	Q15334	1064 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms