RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SH3BP5O60239 455 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 TROVE2P10155 538 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CEACAM1P13688 526 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CTSEP14091 401 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 DGKAP23743 735 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ALDH3A1P30838 453 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 HADHAP40939 763 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 NPY2RP49146 381 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CRADDP78560 199 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ITGA9Q13797 1035 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 DBN1Q16643 649 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ALG11Q2TAA5 492 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CASC4Q6P4E1 433 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CYB5D1Q6P9G0 228 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 PACS1Q6VY07 963 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ASRGL1Q7L266 308 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 KANSL1Q7Z3B3 1105 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 GATAD2AQ86YP4 633 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 HID1Q8IV36 788 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 TRIM42Q8IWZ5 723 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 UNC5BQ8IZJ1 945 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 FSTL5Q8N475 847 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 OR4K2Q8NGD2 314 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 OR52K1Q8NGK4 314 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 RAB3IL1Q8TBN0 382 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 RHBDD1Q8TEB9 315 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SLC39A7Q92504 469 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 TSACCQ96A04 125 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 VPS35Q96QK1 796 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 DUSP23Q9BVJ7 150 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 TSSK1BQ9BXA7 367 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 IQCGQ9H095 443 aaKnown RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 FGF22Q9HCT0 170 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 IL26Q9NPH9 171 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 KLC4Q9NSK0 619 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SIRPGQ9P1W8 387 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 APPL1Q9UKG1 709 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 CNOT6Q9ULM6 557 aaKnown RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 PNMA8BQ9ULN7 279 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-217ENST00000611848 SLC17A4Q9Y2C5 497 aa8.72□□□□□ -1.01
SMAD4-217ENST00000611848 ZNF106Q9H2Y7 1883 aaKnown RBP8.71□□□□□ -1.01
SMAD4-217ENST00000611848 COL5A1P20908 1838 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 GLYATL1P3A0A0U1RQE8 302 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ZCWPW2A0A1B0GU75 182 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 PRSS38A1L453 326 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 DCDC2BA2VCK2 349 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 TPP1O14773 563 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 BIRC5O15392 142 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 AQP9O43315 295 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 MGRN1O60291 552 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 SDC3O75056 442 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 CBFA2T3O75081 653 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ATP5HO75947 161 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 USP1O94782 785 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 UNC5CO95185 931 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 SLC25A14O95258 325 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 CEACAM5P06731 702 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ALPPL2P10696 532 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 TPH1P17752 444 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 BGNP21810 368 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ZNF140P52738 457 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ELF3P78545 371 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 SETDB1Q15047 1291 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ELOCQ15369 112 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 PRRT3Q5FWE3 981 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 MROH9Q5TGP6 573 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 RBFAQ8N0V3 343 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 SLC25A45Q8N413 288 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ZNF548Q8NEK5 533 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 DEFB124Q8NES8 71 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 LMX1AQ8TE12 382 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 STYXQ8WUJ0 223 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 OR1E3Q8WZA6 343 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 PEX13Q92968 403 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 GLYATL1Q969I3 302 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ISL2Q96A47 359 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 CERS2Q96G23 380 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 PDXPQ96GD0 296 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 SCARF2Q96GP6 870 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 FCRL3Q96P31 734 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 LRRC37BQ96QE4 947 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 RANBP9Q96S59 729 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 CDC6Q99741 560 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 TMEM121BQ9BXQ6 578 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 MYLK2Q9H1R3 596 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 CYP4F12Q9HCS2 524 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 TRNAU1APQ9NX07 287 aaKnown RBP8.71□□□□□ -1.02
SMAD4-217ENST00000611848 NLGN3Q9NZ94 848 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 BFARQ9NZS9 450 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 MOSPD1Q9UJG1 213 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 PCOLCE2Q9UKZ9 415 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 RIMKLBQ9ULI2 386 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 PIKFYVEQ9Y2I7 2098 aa8.71□□□□□ -1.02
SMAD4-217ENST00000611848 ASXL3Q9C0F0 2248 aa8.7□□□□□ -1.02
SMAD4-217ENST00000611848 FAM237BA0A1B0GVD1 139 aa8.7□□□□□ -1.02
SMAD4-217ENST00000611848 HEATR9A2RTY3 570 aa8.7□□□□□ -1.02
SMAD4-217ENST00000611848 GPR89AB7ZAQ6 455 aa8.7□□□□□ -1.02
SMAD4-217ENST00000611848 LMO7DNF2Z398 122 aa8.7□□□□□ -1.02
SMAD4-217ENST00000611848 H7C0S8 307 aa8.7□□□□□ -1.02
SMAD4-217ENST00000611848 INPP4BO15327 924 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms