RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 MUS81Q96NY9 551 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 PPP6CO00743 305 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 FPGTO14772 594 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 RGS10O43665 173 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 OR1I1O60431 355 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 SLC6A2P23975 617 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 PTGR1Q14914 329 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 PDE12Q6L8Q7 609 aaKnown RBP13.67□□□□□ -0.22
MUC1-223ENST00000611571 NELL1Q92832 810 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 ART5Q96L15 291 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 SLC29A1Q99808 456 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 TTPALQ9BTX7 342 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 ITM2CQ9NQX7 267 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 KCNE2Q9Y6J6 123 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 STK25O00506 426 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 NOS3P29474 1203 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 AFF1P51825 1210 aaKnown RBP13.67□□□□□ -0.22
MUC1-223ENST00000611571 TPTEP56180 551 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 FBXW4P57775 412 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 CYP4F8P98187 520 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 ZNF846Q147U1 533 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 ZNF697Q5TEC3 545 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 TRIM74Q86UV6 250 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 TRIM73Q86UV7 250 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 CILP2Q8IUL8 1156 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
MUC1-223ENST00000611571 SOCS4Q8WXH5 440 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 BRI3BPQ8WY22 251 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 BIRC7Q96CA5 298 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 CDK5RAP1Q96SZ6 601 aaKnown RBP13.67□□□□□ -0.22
MUC1-223ENST00000611571 OLFM1Q99784 485 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 TCF25Q9BQ70 676 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 C16orf70Q9BSU1 422 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 KIFC1Q9BW19 673 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 LRRC3Q9BY71 257 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
MUC1-223ENST00000611571 GKP32189 559 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 CDC42P60953 191 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 TOP3AQ13472 1001 aaPredicted RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 UAP1L1Q3KQV9 507 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
MUC1-223ENST00000611571 RBM4BQ9BQ04 359 aaKnown RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 RBM4Q9BWF3 364 aaKnown RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 SPATA2Q9UM82 520 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 ST14Q9Y5Y6 855 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 CLDN25C9JDP6 229 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 HOXA2O43364 376 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 XPNPEP2O43895 674 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 SNAI1O95863 264 aaPredicted RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 GLUD1P00367 558 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 IL6P05231 212 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 C1QTNF8P60827 252 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 ZSWIM7Q19AV6 140 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 ARHGAP15Q53QZ3 475 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 SPANXN4Q5MJ08 99 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 CPTPQ5TA50 214 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 SLC24A5Q71RS6 500 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 P2RY8Q86VZ1 359 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 C7orf57Q8NEG2 295 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 IRGQQ8WZA9 623 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 SPG21Q9NZD8 308 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 MYH9P35579 1960 aaKnown RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 NDUFS2O75306 463 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 CLDN9O95484 217 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 HOXA11P31270 313 aaPredicted RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 CDH12P55289 794 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 ERVK-8P63133 956 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 PTCHD4Q6ZW05 846 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 ARMC8Q8IUR7 673 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 ERI1Q8IV48 349 aaKnown RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 TAMM41Q96BW9 452 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 HAPLN3Q96S86 360 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 SORT1Q99523 831 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 CGREF1Q99674 301 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 SGK2Q9HBY8 427 aa13.66□□□□□ -0.22
MUC1-223ENST00000611571 HEMK1Q9Y5R4 338 aaPredicted RBP13.66□□□□□ -0.22
MUC1-223ENST00000611571 LOC110117498-PIK3R3F6TDL0 507 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 PIRO00625 290 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 PABPC4LP0CB38 370 aaKnown RBP13.65□□□□□ -0.22
MUC1-223ENST00000611571 POLR2LP62875 67 aaKnown RBP13.65□□□□□ -0.22
MUC1-223ENST00000611571 IL10RBQ08334 325 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 DAG1Q14118 895 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 TBC1D19Q8N5T2 526 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 WDR36Q8NI36 951 aaKnown RBP13.65□□□□□ -0.22
MUC1-223ENST00000611571 ANKRD49Q8WVL7 239 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 XAGE5Q8WWM1 108 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 ARNTL2Q8WYA1 636 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 NLNQ9BYT8 704 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 TMLHEQ9NVH6 421 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 CFAP97Q9P2B7 532 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 EMCNQ9ULC0 261 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 ERGIC3Q9Y282 383 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 CACNA1CQ13936 2221 aa13.65□□□□□ -0.22
MUC1-223ENST00000611571 ZCWPW2A0A1B0GU75 182 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms