RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 MEP1AQ16819 746 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 DGUOKQ16854 277 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 C6orf136Q5SQH8 315 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 KLHL35Q6PF15 583 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ATG14Q6ZNE5 492 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PAGE2Q7Z2X7 111 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SYVN1Q86TM6 617 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SERPINA9Q86WD7 417 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 TMEM126BQ8IUX1 230 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 MFSD6LQ8IWD5 586 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PHACTR4Q8IZ21 702 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 METTL25Q8N6Q8 603 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ARL10Q8N8L6 244 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 KIAA1191Q96A73 305 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 COX4I2Q96KJ9 171 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 FOPNLQ96NB1 174 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 NODALQ96S42 347 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 C1QTNF1Q9BXJ1 281 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 EBPLQ9BY08 206 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ZFYVE1Q9HBF4 777 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CMTM6Q9NX76 183 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 GJD2Q9UKL4 321 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 FAM234BA2RU67 622 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 I6L893 689 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 BCKDKO14874 412 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 RAP2AP10114 183 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC6A2P23975 617 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 MAPK1P28482 360 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 FMO3P31513 532 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ARCN1P48444 511 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TUFMP49411 452 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SEPHS1P49903 392 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF33AQ06730 810 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CSTF3Q12996 717 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 RAB39AQ14964 217 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 PAGE3Q5JUK9 113 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TTC23LQ6PF05 361 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC24A5Q71RS6 500 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SCD5Q86SK9 330 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TTC30BQ8N4P2 665 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 OR4F6Q8NGB9 312 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 MCOLN3Q8TDD5 553 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SUSD3Q96L08 255 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 NSMCE3Q96MG7 304 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 C11orf84Q9BUA3 381 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 HIPK3Q9H422 1215 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 GPBP1L1Q9HC44 474 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 GNPTGQ9UJJ9 305 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC13A4Q9UKG4 626 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 PCDHB8Q9UN66 801 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 COQ6Q9Y2Z9 468 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 MAGED1Q9Y5V3 778 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SNX8Q9Y5X2 465 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM247A6NEH6 219 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 BOLA2-SMG1P6H3BVE0 249 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ARVCFO00192 962 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CXCR6O00574 342 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 FFAR2O15552 330 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 GPR39O43194 453 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 DFNA5O60443 496 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CLDN11O75508 207 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 STK16O75716 305 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SERPINA1P01009 418 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ALDOCP09972 364 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 PRKAR2AP13861 404 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 IGFBP5P24593 272 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CHI3L1P36222 383 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CRATP43155 626 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 NEK2P51955 445 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ABRQ12979 859 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 C18orf21Q32NC0 220 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 FGD3Q5JSP0 725 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SPANXN4Q5MJ08 99 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 AHSA2Q719I0 299 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 RBFAQ8N0V3 343 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 OR8H2Q8N162 312 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 MRPS31Q92665 395 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 HTRA1Q92743 480 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 RANBP9Q96S59 729 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 REXO4Q9GZR2 422 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ZDHHC6Q9H6R6 413 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TNFRSF12AQ9NP84 129 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CD320Q9NPF0 282 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ATAD3AQ9NVI7 634 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SLAMF8Q9P0V8 285 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 USP22Q9UPT9 525 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SH3GLB1Q9Y371 365 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 LRRC37AA6NMS7 1700 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 LTBP3Q9NS15 1303 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 A0A0J9YVX5 310 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 LCHNA4D1U4 455 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC28A1O00337 649 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ACOT8O14734 319 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 PQBP1O60828 265 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ATP6V1E1P36543 226 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 HTR6P50406 440 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 EEFSECP57772 596 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ELAVL2Q12926 359 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 EPS8Q12929 822 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CBX3Q13185 183 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms