RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 BNIP3LO60238 219 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 KERAO60938 352 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 MBL2P11226 248 aaPredicted RBP20.14■□□□□ 0.81
SSBP3-216ENST00000610401 FCGR1AP12314 374 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 MC4RP32245 332 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 ZFP36L2P47974 494 aaKnown RBP20.14■□□□□ 0.81
SSBP3-216ENST00000610401 DNAH14Q0VDD8 3507 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 AASDHQ4L235 1098 aaPredicted RBP20.14■□□□□ 0.81
SSBP3-216ENST00000610401 XAF1Q6GPH4 301 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 THAP5Q7Z6K1 395 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 TMEM179BQ7Z7N9 219 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 SPARTQ8N0X7 666 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 IRGQQ8WZA9 623 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 UBE2FQ969M7 185 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 DUS3LQ96G46 650 aaKnown RBP20.14■□□□□ 0.81
SSBP3-216ENST00000610401 NSUN3Q9H649 340 aaKnown RBP20.14■□□□□ 0.81
SSBP3-216ENST00000610401 NT5C1B-RDH14C9J2C7 533 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 ADAM17P78536 824 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 OCA2Q04671 838 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 CD47Q08722 323 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 SMN1Q16637 294 aaKnown RBP20.14■□□□□ 0.81
SSBP3-216ENST00000610401 SULT1C3Q6IMI6 304 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 TAF2Q6P1X5 1199 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF773Q6PK81 442 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 CYP20A1Q6UW02 462 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 SLCO6A1Q86UG4 719 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 PACRGLQ8N7B6 248 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 OR2T12Q8NG77 320 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 KIAA1191Q96A73 305 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 NRBF2Q96F24 287 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 RIBC2Q9H4K1 309 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 AMBNQ9NP70 447 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 ITM2CQ9NQX7 267 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 PCTPQ9UKL6 214 aa20.14■□□□□ 0.81
SSBP3-216ENST00000610401 MIA3Q5JRA6 1907 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 H0Y626 953 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 BCAS1O75363 584 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 TRIM16O95361 564 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 ESRRBO95718 433 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF682O95780 498 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 FGF4P08620 206 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 PSMB9P28065 219 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 ADARB1P78563 741 aaKnown RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 GALNT1Q10472 559 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 TAF10Q12962 218 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 HID1Q8IV36 788 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 ABHD11Q8NFV4 315 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 OR13F1Q8NGS4 319 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF599Q96NL3 588 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 CGREF1Q99674 301 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 BARD1Q99728 777 aaKnown RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 PTPN18Q99952 460 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 TUBA8Q9NY65 449 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 PTBP2Q9UKA9 531 aaKnown RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 SNX5Q9Y5X3 404 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 NYNRINQ9P2P1 1898 aaKnown RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 TMED10P49755 219 aaKnown RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 GRB14Q14449 540 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 C10orf111Q8N326 155 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 OR4F6Q8NGB9 312 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 NDNFQ8TB73 568 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 ZFP90Q8TF47 636 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 SKA2Q8WVK7 121 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-216ENST00000610401 ARNT2Q9HBZ2 717 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 SLC6A13Q9NSD5 602 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 KLQ9UEF7 1012 aa20.13■□□□□ 0.81
SSBP3-216ENST00000610401 TBC1D4O60343 1298 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 PFKLP17858 780 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 SPANXN4Q5MJ08 99 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 PNPT1Q8TCS8 783 aaKnown RBP20.12■□□□□ 0.81
SSBP3-216ENST00000610401 HPS1Q92902 700 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 HCSTQ9UBK5 93 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 BLOC1S6Q9UL45 172 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 PDE10AQ9Y233 779 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 ANGPTL3Q9Y5C1 460 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 PDCD11Q14690 1871 aaKnown RBP20.12■□□□□ 0.81
SSBP3-216ENST00000610401 TSC2P49815 1807 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 TNFRSF10BO14763 440 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 CBFA2T3O75081 653 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 ALPLP05186 524 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 ANXA6P08133 673 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 PORP16435 677 aaPredicted RBP20.12■□□□□ 0.81
SSBP3-216ENST00000610401 ATP4BP51164 291 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 FAM189BP81408 668 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 ARTNQ5T4W7 220 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF555Q8NEP9 628 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 OR56A4Q8NGH8 313 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 BRSK1Q8TDC3 778 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 CD320Q9NPF0 282 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 FAM118AQ9NWS6 357 aa20.12■□□□□ 0.81
SSBP3-216ENST00000610401 CLPXO76031 633 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 UROSP10746 265 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 CRHBPP24387 322 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 CYP2C18P33260 490 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 CD97P48960 835 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 ALDH3A2P51648 485 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 ERVK-8P63133 956 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 SLC14A2Q15849 920 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 TXNDC11Q6PKC3 985 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 DSG4Q86SJ6 1040 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms