RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 METRNLQ641Q3 311 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 TCTN3Q6NUS6 607 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 CYB5D1Q6P9G0 228 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 KLHL35Q6PF15 583 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 CERS6Q6ZMG9 384 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 BEND7Q8N7W2 519 aaPredicted RBP13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 TEX19Q8NA77 164 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 FCRL4Q96PJ5 515 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 VAT1Q99536 393 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 ANKMY1Q9P2S6 941 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 TLK1Q9UKI8 766 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 CFAP20Q9Y6A4 193 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 COL12A1Q99715 3063 aa13.09□□□□□ -0.31
POLR2J3-219ENST00000608621 hCG_1818297A0A087WSY0 165 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 UBA6A0AVT1 1052 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 STX7O15400 261 aaKnown RBP13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 AGTP01019 485 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 EBLN1P0CF75 366 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 MSH3P20585 1137 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 ARL4DP49703 201 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 ACY1Q03154 408 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 XRCC4Q13426 336 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 FNBP1LQ5T0N5 605 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 ASB18Q6ZVZ8 466 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 DET1Q7L5Y6 550 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 BPHLQ86WA6 291 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 RCOR2Q8IZ40 523 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 NAT14Q8WUY8 206 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 RUFY1Q96T51 708 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 WWP1Q9H0M0 922 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 C10orf88Q9H8K7 445 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 FGF21Q9NSA1 209 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 IMP3Q9NV31 184 aaKnown RBP13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 HRASLS2Q9NWW9 162 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 PLAAQ9Y263 795 aa13.08□□□□□ -0.32
POLR2J3-219ENST00000608621 OR5K3A6NET4 321 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 MGAT4DA6NG13 374 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 HACD1B0YJ81 288 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 C21orf140B9A014 251 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 RFPL1O75677 317 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 MTHFD1P11586 935 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 AKT1P31749 480 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 MAGEA1P43355 309 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 MLLT10P55197 1068 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 LONRF2Q1L5Z9 754 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 DNTTIP2Q5QJE6 756 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 KMT5CQ86Y97 462 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 CCDC50Q8IVM0 306 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 KATNAL2Q8IYT4 538 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 D2HGDHQ8N465 521 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 MIB2Q96AX9 1013 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 ZNF514Q96K75 400 aaPredicted RBP13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 C12orf66Q96MD2 445 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 QKIQ96PU8 341 aaKnown RBP eCLIP13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 ACTL8Q9H568 366 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 KCND1Q9NSA2 647 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 FAM8A1Q9UBU6 413 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 RSPH14Q9UHP6 348 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 TRHDEQ9UKU6 1024 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 ACSL5Q9ULC5 683 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 MAN2B2Q9Y2E5 1009 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 ARL5AQ9Y689 179 aa13.07□□□□□ -0.32
POLR2J3-219ENST00000608621 OR6C74A6NCV1 312 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 TLCD2A6NGC4 264 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 C2orf81A6NN90 581 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 AKR1B15C9JRZ8 316 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 H7C0C1 242 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 DNAJB5O75953 348 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 POLBP06746 335 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 LPOP22079 712 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 RBL1P28749 1068 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 ATP5OP48047 213 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 MARCKSL1P49006 195 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 PMS2P54278 862 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 GEMP55040 296 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 HADHBP55084 474 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 RPS15P62841 145 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 HSD11B2P80365 405 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 SEMA5AQ13591 1074 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 GSE1Q14687 1217 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 DUS1LQ6P1R4 473 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 FBXO38Q6PIJ6 1188 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 OOSP2Q86WS3 158 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 APLFQ8IW19 511 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 OR4K2Q8NGD2 314 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 OR2L2Q8NH16 312 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 ZFPM2Q8WW38 1151 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 CD180Q99467 661 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 FSD1LQ9BXM9 530 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 GPR87Q9BY21 358 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 TRIM55Q9BYV6 548 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms