RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 AKAP7Q9P0M2 348 aaPredicted RBP14□□□□□ -0.17
HDDC2-206ENST00000608461 SCHIP1Q9P0W5 487 aaPredicted RBP14□□□□□ -0.17
HDDC2-206ENST00000608461 PDP2Q9P2J9 529 aa14□□□□□ -0.17
HDDC2-206ENST00000608461 HEBP2Q9Y5Z4 205 aa14□□□□□ -0.17
HDDC2-206ENST00000608461 UNC13CQ8NB66 2214 aa14□□□□□ -0.17
HDDC2-206ENST00000608461 CCDC78A2IDD5 438 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 OR51F1A6NGY5 319 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 LIN7AO14910 233 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-206ENST00000608461 HGSO14964 777 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-206ENST00000608461 NDUFS1P28331 727 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 NMBRP28336 390 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 PDX1P52945 283 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 LIMK2P53671 638 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 DRG2P55039 364 aaKnown RBP13.99□□□□□ -0.17
HDDC2-206ENST00000608461 CRADDP78560 199 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 CLCA4Q14CN2 919 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 MORF4L2Q15014 288 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 SEPT7Q16181 437 aaKnown RBP13.99□□□□□ -0.17
HDDC2-206ENST00000608461 AMZ1Q400G9 498 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 RNF187Q5TA31 235 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-206ENST00000608461 TMEM71Q6P5X7 295 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 SYT10Q6XYQ8 523 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 SDCCAG8Q86SQ7 713 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-206ENST00000608461 LRRC6Q86X45 466 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 SLITRK4Q8IW52 837 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 LMNTD2Q8IXW0 634 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 CFAP206Q8IYR0 622 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 GPR150Q8NGU9 434 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 CMKLR1Q99788 373 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 VPS9D1Q9Y2B5 631 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 PCDHB1Q9Y5F3 818 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 COLEC10Q9Y6Z7 277 aa13.99□□□□□ -0.17
HDDC2-206ENST00000608461 AVILO75366 819 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 USP1O94782 785 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 SLC35G4P0C7Q5 338 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 IVDP26440 423 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 ADARP55265 1226 aaKnown RBP13.98□□□□□ -0.17
HDDC2-206ENST00000608461 ERVPABLB-1P60509 514 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 CYP4F3Q08477 520 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 RPE65Q16518 533 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 ZNF658BQ4V348 819 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-206ENST00000608461 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
HDDC2-206ENST00000608461 CASC4Q6P4E1 433 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 KLHL35Q6PF15 583 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 FAM83HQ6ZRV2 1179 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-206ENST00000608461 MAATS1Q7Z4T9 603 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 PROSER1Q86XN7 944 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 MARCH9Q86YJ5 346 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 JAMLQ86YT9 394 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 PLXDC1Q8IUK5 500 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 KLHL7Q8IXQ5 586 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 CLDN19Q8N6F1 224 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 SPATA4Q8NEY3 305 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 ZCCHC14Q8WYQ9 949 aaKnown RBP13.98□□□□□ -0.17
HDDC2-206ENST00000608461 MFSD3Q96ES6 412 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 ZNF578Q96N58 590 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-206ENST00000608461 CARD6Q9BX69 1037 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 B3GNT4Q9C0J1 378 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 RAB33BQ9H082 229 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 COG4Q9H9E3 785 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 ATXN7L1Q9ULK2 861 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-206ENST00000608461 WDR37Q9Y2I8 494 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 ASPMQ8IZT6 3477 aa13.98□□□□□ -0.17
HDDC2-206ENST00000608461 PIKFYVEQ9Y2I7 2098 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 OR52A4PA6NMU1 304 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 KIF2AO00139 706 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 IFRD1O00458 451 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 PRMT5O14744 637 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 KPNA5O15131 536 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 TOX3O15405 576 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 UBXN7O94888 489 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 VAPBO95292 243 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 TTC4O95801 387 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 POLBP06746 335 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 PRSS56P0CW18 603 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 MTHFD1P11586 935 aaKnown RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 OGNP20774 298 aaKnown RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 RPS3P23396 243 aaKnown RBP eCLIP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 PBLDP30039 288 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 ARCN1P48444 511 aaKnown RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 GABREP78334 506 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 DNAJC21Q5F1R6 531 aaKnown RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 IZUMO3Q5VZ72 239 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 USP53Q70EK8 1073 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 RAB11FIP2Q7L804 512 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 ZNF572Q7Z3I7 529 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 C17orf53Q8N3J3 647 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 BBOF1Q8ND07 529 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 GABPB2Q8TAK5 448 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 LRRC39Q96DD0 335 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 SNF8Q96H20 258 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 SIGLEC10Q96LC7 697 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 SLC46A1Q96NT5 459 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 RDH14Q9HBH5 336 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 EPB41L5Q9HCM4 733 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 RPS6KL1Q9Y6S9 549 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms