RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 EBPLQ9BY08 206 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 IGFLR1Q9H665 355 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 UGT1A7Q9HAW7 530 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 UGT1A10Q9HAW8 530 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 UGT1A8Q9HAW9 530 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 KCTD5Q9NXV2 234 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 GPN3Q9UHW5 284 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 GLYATL1P3A0A0U1RQE8 302 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PRAMEF1O95521 474 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 C22orf31O95567 290 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 IL23RQ5VWK5 629 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 LIX1Q8N485 282 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 KAT8Q9H7Z6 458 aaKnown RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF510Q9Y2H8 683 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PDCD5O14737 125 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 NCK1P16333 377 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PTX3P26022 381 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 NRG3P56975 720 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PLEKHG4Q58EX7 1191 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 IQSEC1Q6DN90 963 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 RGL4Q8IZJ4 473 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 TP53INP1Q96A56 240 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CHIAQ9BZP6 476 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SLC22A4Q9H015 551 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 EHD1Q9H4M9 534 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CHMP1AQ9HD42 196 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 MIOSQ9NXC5 875 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ECHS1P30084 290 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SF1Q15637 639 aaKnown RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ABCA11PQ4W5N1 156 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 BRMS1LQ5PSV4 323 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ATG10Q9H0Y0 220 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 MKLN1Q9UL63 735 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 hCG_2039718K7EN88 272 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 MSI1O43347 362 aaKnown RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 FMO3P31513 532 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 MAPK12P53778 367 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CACNG1Q06432 222 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PRR23BQ6ZRT6 265 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 DGLUCYQ7Z3D6 616 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 IQCKQ8N0W5 287 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 TIFAQ96CG3 184 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CD320Q9NPF0 282 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PTCH2Q9Y6C5 1203 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CYP3A7-CYP3A51PA0A087WV96 503 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CYP3A7P24462 503 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 DDX6P26196 483 aaKnown RBP eCLIP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 TPTEP56180 551 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CRY2Q49AN0 593 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PPM1JQ5JR12 505 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 RASGEF1CQ8N431 466 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 DNAJC19Q96DA6 116 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ZFP3Q96NJ6 502 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 MALT1Q9UDY8 824 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 FABP12A6NFH5 140 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 C5orf60A6NFR6 353 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 CLDN5O00501 218 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 C2P06681 752 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 DCDC1P59894 354 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 TSPAN5P62079 268 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 POMZP3Q6PJE2 187 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 UBE2J2Q8N2K1 259 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 BEND7Q8N7W2 519 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 NETO2Q8NC67 525 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 RFT1Q96AA3 541 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 C5orf34Q96MH7 638 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SNTG1Q9NSN8 517 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 HPF1Q9NWY4 346 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 RCOR3Q9P2K3 495 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SCN2AQ99250 2005 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 TNFSF9P41273 254 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 NOMO3P69849 1222 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ARL13AQ5H913 290 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 METTL21CQ5VZV1 264 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 GALNT15Q8N3T1 639 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 ELAC1Q9H777 363 aaKnown RBP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SMURF2Q9HAU4 748 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SPEF1Q9Y4P9 236 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 RB1P06400 928 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PDX1P52945 283 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 SMARCB1Q12824 385 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 GRSF1Q12849 480 aaKnown RBP eCLIP9.5□□□□□ -0.89
CSMD1-217ENST00000602723 GPR158Q5T848 1215 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PRAMEF17Q5VTA0 474 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 LRRC69Q6ZNQ3 347 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 OR4C6Q8NH72 309 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 OR8D1Q8WZ84 308 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 AKT1S1Q96B36 256 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 PCDHB1Q9Y5F3 818 aa9.5□□□□□ -0.89
CSMD1-217ENST00000602723 TNS2Q63HR2 1409 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TIE1P35590 1138 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 DEFA5Q01523 94 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 PARP15Q460N3 678 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TCEAL6Q6IPX3 200 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 KAZALD1Q96I82 304 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms