RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 CD83Q01151 205 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 RELAQ04206 551 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 IQCCQ4KMZ1 466 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 EIPR1Q53HC9 387 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 GHDCQ8N2G8 530 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 SMG8Q8ND04 991 aaKnown RBP12.1□□□□□ -0.47
SHANK2-218ENST00000601538 CHPT1Q8WUD6 406 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 TCTEX1D2Q8WW35 142 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 SEC14L1Q92503 715 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 GIMAP5Q96F15 307 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 SPATA9Q9BWV2 254 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 PTPRHQ9HD43 1115 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 C16orf46Q6P387 395 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ISLR2Q6UXK2 745 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 C10orf82Q8WW14 230 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 CHD1O14646 1710 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 TRBC1P01850 177 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 NUDT7P0C024 238 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ATXN1P54253 815 aaKnown RBP12.1□□□□□ -0.47
SHANK2-218ENST00000601538 GRK1Q15835 563 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 GALNT5Q7Z7M9 940 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 OR2L8Q8NGY9 312 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 RGCCQ9H4X1 137 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 TMEM27Q9HBJ8 222 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 PER2O15055 1255 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ZMPSTE24O75844 475 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 NDUFB10O96000 172 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 MAGP20916 626 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 RGS6P49758 472 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 RGS8P57771 180 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-218ENST00000601538 CRTC2Q53ET0 693 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-218ENST00000601538 RBFAQ8N0V3 343 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 PARP8Q8N3A8 854 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 RHOJQ9H4E5 214 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.1□□□□□ -0.473e-6■■□□□ 12.3
SHANK2-218ENST00000601538 IKZF2Q9UKS7 526 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ALKQ9UM73 1620 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 FUOMA2VDF0 154 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 MICAL2O94851 1124 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 AMHR2Q16671 573 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ANKS1BQ7Z6G8 1248 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 SPARTQ8N0X7 666 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ATP13A3Q9H7F0 1226 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 C1orf109Q9NX04 203 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 THUMPD1Q9NXG2 353 aaKnown RBP12.1□□□□□ -0.47
SHANK2-218ENST00000601538 C10orf71Q711Q0 1435 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 SLC12A8A0AV02 714 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 H0Y858 1186 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 CAPN15O75808 1086 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 PRKAG1P54619 331 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 AP2M1Q96CW1 435 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 NELFAQ9H3P2 528 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 TUBB1Q9H4B7 451 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 SNX15Q9NRS6 342 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 UCKL1Q9NWZ5 548 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 PTPRJQ12913 1337 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 VNN2O95498 520 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 CD72P21854 359 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 ZNF267Q14586 743 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-218ENST00000601538 CYP1B1Q16678 543 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 LDLRAP1Q5SW96 308 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 IDNKQ5T6J7 187 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 GLYATQ6IB77 296 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 POC1BQ8TC44 478 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 PCDHB16Q9NRJ7 776 aa12.1□□□□□ -0.47
SHANK2-218ENST00000601538 CRB1P82279 1406 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 M0R129 80 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 GMFGO60234 142 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 GNAZP19086 355 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 NOS2P35228 1153 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 AIF1P55008 147 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 STXBP1P61764 594 aaKnown RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 PCBP1Q15365 356 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 MPPE1Q53F39 396 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 DENND1CQ8IV53 801 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 LINC00471Q8N535 108 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ANKRD52Q8NB46 1076 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 HYLS1Q96M11 299 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 PLEKHA6Q9Y2H5 1048 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SSX5O60225 188 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 CCNB2O95067 398 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ICAM1P05362 532 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SNRPD1P62314 119 aaKnown RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 PCDHGA11Q9Y5H2 935 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 MIPP30301 263 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SNAPC2Q13487 334 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SPATA22Q8NHS9 363 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SLC38A4Q969I6 547 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 NPAS2Q99743 824 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 BLOC1S4Q9NUP1 217 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TNFRSF10DQ9UBN6 386 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 DISC1C4P0D8 188 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms