RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 DIRAS1O95057 198 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 CHEK2O96017 543 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 CDKN1CP49918 316 aaPredicted RBP18.11■□□□□ 0.49
UPF1-210ENST00000600689 TSPY1Q01534 308 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 EMX1Q04741 257 aaPredicted RBP18.11■□□□□ 0.49
UPF1-210ENST00000600689 NR6A1Q15406 480 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 ANKRD13BQ86YJ7 626 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 PROKR1Q8TCW9 393 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 AURKBQ96GD4 344 aaPredicted RBP18.11■□□□□ 0.49
UPF1-210ENST00000600689 ABCG8Q9H221 673 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 RASSF1Q9NS23 344 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 MIOSQ9NXC5 875 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 SLCO3A1Q9UIG8 710 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 ENPP5Q9UJA9 477 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 ZNF225Q9UK10 706 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 MATN4O95460 622 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 CNPP09543 421 aaKnown RBP18.11■□□□□ 0.49
UPF1-210ENST00000600689 ZNF157P51786 506 aaPredicted RBP18.11■□□□□ 0.49
UPF1-210ENST00000600689 KCNC4Q03721 635 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 GTF2H3Q13889 308 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 PCBP1Q15365 356 aaKnown RBP eCLIP18.11■□□□□ 0.492e-10■■□□□ 11.5
UPF1-210ENST00000600689 TRIP4Q15650 581 aaPredicted RBP18.11■□□□□ 0.49
UPF1-210ENST00000600689 GTDC1Q4AE62 458 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 MARC1Q5VT66 337 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 KDELC1Q6UW63 502 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 IL27RAQ6UWB1 636 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 BHLHA9Q7RTU4 235 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 LIMS2Q7Z4I7 341 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 RORBQ92753 470 aa18.11■□□□□ 0.49
UPF1-210ENST00000600689 MYLKQ15746 1914 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 TBX1O43435 398 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 NDUFB5O43674 189 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 CACNG3O60359 315 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 SEC24AO95486 1093 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 AIF1P55008 147 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 TTC23Q5W5X9 447 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 CXCL17Q6UXB2 119 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 SCN4BQ8IWT1 228 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 TOP6BLQ8N6T0 577 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 MAGED4Q96JG8 741 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 ATOH8Q96SQ7 321 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 GPR21Q99679 349 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 TDRD1Q9BXT4 1180 aaKnown RBP18.1■□□□□ 0.49
UPF1-210ENST00000600689 CATSPERBQ9H7T0 1116 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.1■□□□□ 0.49
UPF1-210ENST00000600689 CD274Q9NZQ7 290 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 ZNF99A8MXY4 864 aaPredicted RBP18.1■□□□□ 0.49
UPF1-210ENST00000600689 MYO1GB0I1T2 1018 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 E9PAM4 449 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 RAP2AP10114 183 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 UMPSP11172 480 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 PFKLP17858 780 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 CTGFP29279 349 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 SERPINB1P30740 379 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 ZFP36L2P47974 494 aaKnown RBP18.1■□□□□ 0.49
UPF1-210ENST00000600689 EEFSECP57772 596 aaKnown RBP18.1■□□□□ 0.49
UPF1-210ENST00000600689 TIAL1Q01085 375 aaKnown RBP eCLIP18.1■□□□□ 0.49
UPF1-210ENST00000600689 VAC14Q08AM6 782 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 SELENBP1Q13228 472 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 LAIR2Q6ISS4 152 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 GCNT7Q6ZNI0 430 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 HID1Q8IV36 788 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 EXOC2Q96KP1 924 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 YTHDF1Q9BYJ9 559 aaKnown RBP18.1■□□□□ 0.49
UPF1-210ENST00000600689 ACTR8Q9H981 624 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 ZFP14Q9HCL3 533 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 TMLHEQ9NVH6 421 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 COMMD8Q9NX08 183 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 VAPAQ9P0L0 249 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 FBXO10Q9UK96 956 aa18.1■□□□□ 0.49
UPF1-210ENST00000600689 LOC100130705A0A1B0GUX0 176 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 FFAR3O14843 346 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 GPR42O15529 346 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 GSNP06396 782 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 JUNBP17275 347 aaPredicted RBP18.09■□□□□ 0.49
UPF1-210ENST00000600689 BRCC3P46736 316 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 PRKG2Q13237 762 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 RAPSNQ13702 412 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 PTGR1Q14914 329 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 PTPRRQ15256 657 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 PHKG1Q16816 387 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 SYT16Q17RD7 645 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 C6orf136Q5SQH8 315 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 DET1Q7L5Y6 550 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 HEATR4Q86WZ0 1026 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 RIMKLAQ8IXN7 391 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 IKZF5Q9H5V7 419 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 TMED5Q9Y3A6 229 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 TRIM64BA6NI03 449 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 PFDN6O15212 129 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 GPR39O43194 453 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 UGT2B11O75310 529 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 EEDO75530 441 aaKnown RBP18.09■□□□□ 0.49
UPF1-210ENST00000600689 FGF4P08620 206 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 C7P10643 843 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 COLEC12Q5KU26 742 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 GALNT10Q86SR1 603 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 PTRH1Q86Y79 214 aaKnown RBP18.09■□□□□ 0.49
UPF1-210ENST00000600689 TRPV1Q8NER1 839 aa18.09■□□□□ 0.49
UPF1-210ENST00000600689 OR2T12Q8NG77 320 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms