RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 NSG1P42857 185 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 ACADVLP49748 655 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 RGS4P49798 205 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 STX1BP61266 288 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 C9orf50Q5SZB4 431 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 LPCAT4Q643R3 524 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 SERPINA13PQ6UXR4 307 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 Q6ZSR9 355 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 Q6ZVL8 140 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 DHDDSQ86SQ9 333 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 OR4F6Q8NGB9 312 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 ZNF382Q96SR6 550 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 HEPHQ9BQS7 1158 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 C1orf50Q9BV19 199 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 SLC25A23Q9BV35 468 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 FAM126AQ9BYI3 521 aaPredicted RBP14.24□□□□□ -0.13
VRK3-217ENST00000599538 PCDHAC1Q9H158 963 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 MAP10Q9P2G4 905 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 OARD1Q9Y530 152 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 GPR45Q9Y5Y3 372 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 ACOT8O14734 319 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 RAD51BO15315 384 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 CAPN1P07384 714 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 ME2P23368 584 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 RECQLP46063 649 aaPredicted RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 METAP1P53582 386 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 MRPS22P82650 360 aaKnown RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 GTF2H2Q13888 395 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 FLOT2Q14254 428 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 MAPRE2Q15555 327 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 ZNF648Q5T619 568 aaPredicted RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 GTF2H2CQ6P1K8 395 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 RTL10Q7L3V2 364 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 VRK3Q8IV63 474 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 LEMD2Q8NC56 503 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 BHLHE22Q8NFJ8 381 aaPredicted RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 N4BP2L2Q92802 583 aaPredicted RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 IL1RL2Q9HB29 575 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 PCDH12Q9NPG4 1184 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 SLC52A3Q9NQ40 469 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 SDR39U1Q9NRG7 319 aaPredicted RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 LATS2Q9NRM7 1088 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 FBXO10Q9UK96 956 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 SARDHQ9UL12 918 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 IGLV3-16A0A075B6K0 115 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 PRORSD1PA6NEY8 169 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 ANTXRLA6NF34 631 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 TIMP2P16035 220 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 ETV3P41162 512 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 ZFP36L2P47974 494 aaKnown RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 PIK3CGP48736 1102 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 TRAF3Q13114 568 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 DMC1Q14565 340 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 ZXDCQ2QGD7 858 aaPredicted RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 C8orf82Q6P1X6 216 aaPredicted RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 SFTPA1Q8IWL2 248 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 MIER2Q8N344 545 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 NUDT8Q8WV74 236 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 SMG7Q92540 1137 aaKnown RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 RHBDF1Q96CC6 855 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 EGFL8Q99944 293 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 SPATA16Q9BXB7 569 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 NUSAP1Q9BXS6 441 aaKnown RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 IPPKQ9H8X2 491 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 PIDD1Q9HB75 910 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 DUS2Q9NX74 493 aaKnown RBP14.23□□□□□ -0.13
VRK3-217ENST00000599538 ZDHHC7Q9NXF8 308 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 SUN2Q9UH99 717 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
VRK3-217ENST00000599538 MYO9BQ13459 2157 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 GIPC1O14908 333 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 MAP3K7O43318 606 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 ACADSP16219 412 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 DGKGP49619 791 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 PTPN5P54829 565 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 ARHGEF7Q14155 803 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 NAIF1Q69YI7 327 aaPredicted RBP14.22□□□□□ -0.13
VRK3-217ENST00000599538 OGFOD2Q6N063 350 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 IZUMO2Q6UXV1 221 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 ADGRG6Q86SQ4 1221 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 SFRP1Q8N474 314 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 METTL6Q8TCB7 284 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 NXPE3Q969Y0 559 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 OTUB2Q96DC9 234 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 ANKRD27Q96NW4 1050 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 TRIM8Q9BZR9 551 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 TMCO1Q9UM00 188 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 ITM2BQ9Y287 266 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 RWDD3Q9Y3V2 267 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 CEP290O15078 2479 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 C2orf16Q68DN1 1984 aa14.22□□□□□ -0.13
VRK3-217ENST00000599538 PRRT4C9JH25 899 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ZNF197O14709 1029 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 DNAJA2O60884 412 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 TULP3O75386 442 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ADH5P11766 374 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 TCF3P15923 654 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 PEX2P28328 305 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 SLC6A11P48066 632 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 UFM1P61960 85 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms