RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 POLHQ9Y253 713 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 PCDHGA6Q9Y5G7 932 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 FER1L5A0AVI2 2057 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 SHANK1Q9Y566 2161 aa14.36□□□□□ -0.11
IRF3-223ENST00000599223 GLYATL1P3A0A0U1RQE8 302 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 MTSS1O43312 755 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 SPOPO43791 374 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 CREG1O75629 220 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 MTHFD1P11586 935 aaKnown RBP14.35□□□□□ -0.11
IRF3-223ENST00000599223 VCLP18206 1134 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 HALP42357 657 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 TBX2Q13207 712 aaPredicted RBP14.35□□□□□ -0.11
IRF3-223ENST00000599223 OLIG2Q13516 323 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 IL10RAQ13651 578 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 SEPT6Q14141 434 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 SLC1A5Q15758 541 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 CPZQ66K79 652 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 CCDC70Q6NSX1 233 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 DET1Q7L5Y6 550 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 GLT6D1Q7Z4J2 308 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 ZC3H18Q86VM9 953 aaKnown RBP14.35□□□□□ -0.11
IRF3-223ENST00000599223 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
IRF3-223ENST00000599223 PPM1MQ96MI6 270 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 QKIQ96PU8 341 aaKnown RBP eCLIP14.35□□□□□ -0.11
IRF3-223ENST00000599223 TWSG1Q9GZX9 223 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 TRABDQ9H4I3 376 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 C10orf88Q9H8K7 445 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 IMP3Q9NV31 184 aaKnown RBP14.35□□□□□ -0.11
IRF3-223ENST00000599223 SMOXQ9NWM0 555 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 DDX56Q9NY93 547 aaKnown RBP14.35□□□□□ -0.11
IRF3-223ENST00000599223 KLHL8Q9P2G9 620 aaPredicted RBP14.35□□□□□ -0.11
IRF3-223ENST00000599223 TLK1Q9UKI8 766 aa14.35□□□□□ -0.11
IRF3-223ENST00000599223 ICE1Q9Y2F5 2266 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 hCG_1818297A0A087WSY0 165 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 OR5K3A6NET4 321 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 RFPL1O75677 317 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 NTRK1P04629 796 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 ARCN1P48444 511 aaKnown RBP14.34□□□□□ -0.11
IRF3-223ENST00000599223 NR2C2P49116 596 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 MLLT10P55197 1068 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 KLRB1Q12918 225 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 CHAF1BQ13112 559 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 PLCL1Q15111 1095 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 TCEAL1Q15170 157 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 PPP2R5EQ16537 467 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 FNBP1LQ5T0N5 605 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 TCTN3Q6NUS6 607 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 FAM199XQ6PEV8 388 aaPredicted RBP14.34□□□□□ -0.11
IRF3-223ENST00000599223 TMEM220Q6QAJ8 160 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 SIDT2Q8NBJ9 832 aaKnown RBP14.34□□□□□ -0.11
IRF3-223ENST00000599223 DTX3LQ8TDB6 740 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 UBXN4Q92575 508 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 PANX2Q96RD6 677 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 FCRL5Q96RD9 977 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 SRPK1Q96SB4 655 aaKnown RBP14.34□□□□□ -0.11
IRF3-223ENST00000599223 WWP1Q9H0M0 922 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 ZNHIT6Q9NWK9 470 aaKnown RBP14.34□□□□□ -0.11
IRF3-223ENST00000599223 FAM8A1Q9UBU6 413 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 RARRES3Q9UL19 164 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 TFR2Q9UP52 801 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 MAN2B2Q9Y2E5 1009 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 PCDHB3Q9Y5E6 796 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 ARL5AQ9Y689 179 aa14.34□□□□□ -0.11
IRF3-223ENST00000599223 PIPSLA2A3N6 862 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 TLCD2A6NGC4 264 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 MKRN2OSH3BPM6 223 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 DDX3YO15523 660 aaKnown RBP14.33□□□□□ -0.12
IRF3-223ENST00000599223 PSTPIP1O43586 416 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 SGTAO43765 313 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 PRAMEF1O95521 474 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 EPOP01588 193 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 SLC1A1P43005 524 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 TFDP2Q14188 446 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 GPR19Q15760 415 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 DNTTIP2Q5QJE6 756 aaKnown RBP14.33□□□□□ -0.12
IRF3-223ENST00000599223 LDLRAP1Q5SW96 308 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 FBXO38Q6PIJ6 1188 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 ASB18Q6ZVZ8 466 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 LILRA3Q8N6C8 439 aaPredicted RBP14.33□□□□□ -0.12
IRF3-223ENST00000599223 SLC38A9Q8NBW4 561 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 BRSK1Q8TDC3 778 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 ZNF514Q96K75 400 aaPredicted RBP14.33□□□□□ -0.12
IRF3-223ENST00000599223 RMDN2Q96LZ7 410 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 CCDC42Q96M95 316 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 TTC25Q96NG3 672 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 INSM2Q96T92 566 aaPredicted RBP14.33□□□□□ -0.12
IRF3-223ENST00000599223 NRTNQ99748 197 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 ZCCHC2Q9C0B9 1178 aaKnown RBP14.33□□□□□ -0.12
IRF3-223ENST00000599223 FGF21Q9NSA1 209 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 KCND3Q9UK17 655 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 PADI1Q9ULC6 663 aa14.33□□□□□ -0.12
IRF3-223ENST00000599223 RP1L1Q8IWN7 2480 aaPredicted RBP14.33□□□□□ -0.12
IRF3-223ENST00000599223 PIKFYVEQ9Y2I7 2098 aa14.32□□□□□ -0.12
IRF3-223ENST00000599223 C21orf140B9A014 251 aa14.32□□□□□ -0.12
IRF3-223ENST00000599223 AGTP01019 485 aa14.32□□□□□ -0.12
IRF3-223ENST00000599223 HLA-DPA1P20036 260 aa14.32□□□□□ -0.12
IRF3-223ENST00000599223 AKT1P31749 480 aa14.32□□□□□ -0.12
IRF3-223ENST00000599223 UQCRFS1P47985 274 aa14.32□□□□□ -0.12
IRF3-223ENST00000599223 CD97P48960 835 aa14.32□□□□□ -0.12
IRF3-223ENST00000599223 KPNA2P52292 529 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms