RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CNTFP26441 200 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 SPRP35270 261 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A3P35503 534 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A5P35504 534 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 VAC14Q08AM6 782 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 FGL2Q14314 439 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 SEMA3AQ14563 771 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 ITIH4Q14624 930 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 DBN1Q16643 649 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 KIF19Q2TAC6 998 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 WSCD2Q2TBF2 565 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 LDLRAP1Q5SW96 308 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 GRTP1Q5TC63 336 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 LGSNQ5TDP6 509 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 BROXQ5VW32 411 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 PACS1Q6VY07 963 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 MICALCLQ6ZW33 695 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 LDB1Q86U70 411 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 NLRP8Q86W28 1048 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 SERPINA9Q86WD7 417 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 PIANPQ8IYJ0 282 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 RBFAQ8N0V3 343 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 IQCKQ8N0W5 287 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 TP53I13Q8NBR0 393 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 CADM4Q8NFZ8 388 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 HEXDCQ8WVB3 486 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 BTN2A2Q8WVV5 523 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 GLYATL1Q969I3 302 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 DCUN1D1Q96GG9 259 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 NAF1Q96HR8 494 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 PSMG3-AS1Q96PY0 264 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 VPS35Q96QK1 796 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 COPS8Q99627 209 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 MYOCQ99972 504 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 TMEM109Q9BVC6 243 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 CLPBQ9H078 707 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 MIR1-1HGQ9H1L0 117 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 CCDC68Q9H2F9 335 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 WDR26Q9H7D7 661 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A7Q9HAW7 530 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A10Q9HAW8 530 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 UGT1A8Q9HAW9 530 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 FTSJ1Q9UET6 329 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 ZNF180Q9UJW8 692 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 DMTF1Q9Y222 760 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 PSAT1Q9Y617 370 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 SLCO1B1Q9Y6L6 691 aa11.9□□□□□ -0.5
SHKBP1-213ENST00000597325 LRRK1Q38SD2 2015 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 FADS2P1A8MWK0 482 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 F8W8V4 182 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 FPGTO14772 594 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 SUV39H1O43463 412 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ATP8B1O43520 1251 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 LATO43561 262 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 OPA1O60313 960 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 RFPL3O75679 317 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 SLC25A14O95258 325 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 S1PR4O95977 384 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 MYZAPP0CAP1 466 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ZNF7P17097 686 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 MSH3P20585 1137 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 TEAD1P28347 426 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ATP5DP30049 168 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 IGFALSP35858 605 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 CSNK1EP49674 416 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 CDKN1CP49918 316 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 PCBP4P57723 403 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 GTF2H3Q13889 308 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 TMED2Q15363 201 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 GPRC6AQ5T6X5 926 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 PNCKQ6P2M8 343 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ADAMTSL4Q6UY14 1074 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ATG14Q6ZNE5 492 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 HEATR4Q86WZ0 1026 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 TDRPQ86YL5 185 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 CACTIN-AS1Q8N1I8 211 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 EXD3Q8N9H8 876 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 DDHD1Q8NEL9 900 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 DCAKDQ8WVC6 231 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ATXN7L3BQ96GX2 97 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 VPS39Q96JC1 886 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 LENG8Q96PV6 779 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 RBBP8Q99708 897 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 STMN4Q9H169 189 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 CENPHQ9H3R5 247 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 RHOJQ9H4E5 214 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 FZD3Q9NPG1 666 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 PHPT1Q9NRX4 125 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ZNF446Q9NWS9 450 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 ZDHHC3Q9NYG2 299 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 CORO1CQ9ULV4 474 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 SNX11Q9Y5W9 270 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
SHKBP1-213ENST00000597325 AGAP14A8MT82 685 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 METTL12A8MUP2 240 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 PRAMEF26H0Y7S4 382 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 K7ESM1 405 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 MAP2K7O14733 419 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms