RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 TTC1Q99614 292 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 STRADBQ9C0K7 418 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 EPB41L1Q9H4G0 881 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 SYNDIG1Q9H7V2 258 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 POT1Q9NUX5 634 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 SYBUQ9NX95 663 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 SOX13Q9UN79 622 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 SATB2Q9UPW6 733 aa16.07■□□□□ 0.16
CHERP-206ENST00000597261 IGHV5-10-1A0A0J9YXX1 117 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 LILRA5A6NI73 299 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 SDR42E2A6NKP2 422 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 BRINP1O60477 761 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 TMEM63AO94886 807 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 ARNTP27540 789 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 HALP42357 657 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 MAGEA3P43357 314 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 ARCN1P48444 511 aaKnown RBP16.06■□□□□ 0.16
CHERP-206ENST00000597261 TERF1P54274 439 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 GABREP78334 506 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 PRAMEP78395 509 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 PTK6Q13882 451 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 PPP1R7Q15435 360 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 FASTKD1Q53R41 847 aaKnown RBP16.06■□□□□ 0.16
CHERP-206ENST00000597261 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
CHERP-206ENST00000597261 SYDE1Q6ZW31 735 aaPredicted RBP16.06■□□□□ 0.16
CHERP-206ENST00000597261 HM13Q8TCT9 377 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 ZFPM2Q8WW38 1151 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 FGF11Q92914 225 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHERP-206ENST00000597261 TMEM159Q96B96 161 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 MFSD3Q96ES6 412 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 ZNF578Q96N58 590 aaPredicted RBP16.06■□□□□ 0.16
CHERP-206ENST00000597261 RUNDC3BQ96NL0 473 aa16.06■□□□□ 0.16
CHERP-206ENST00000597261 INSM2Q96T92 566 aaPredicted RBP16.06■□□□□ 0.16
CHERP-206ENST00000597261 XAB2Q9HCS7 855 aaKnown RBP16.06■□□□□ 0.16
CHERP-206ENST00000597261 BPTFQ12830 3046 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 WDFY3Q8IZQ1 3526 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 SRRM3A6NNA2 597 aaPredicted RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 CCDC188H7C350 402 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 QSOX1O00391 747 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 CD3EAPO15446 510 aaKnown RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 OR1I1O60431 355 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 CSF2RBP32927 897 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 PPARGP37231 505 aaPredicted RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 MLLT3P42568 568 aaPredicted RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 ERVPABLB-1P60509 514 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 TRA2AQ13595 282 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHERP-206ENST00000597261 SEMA3AQ14563 771 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 TBC1D25Q3MII6 688 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 RAB11FIP2Q7L804 512 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 TMEM135Q86UB9 458 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 TRIM48Q8IWZ4 208 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 MPP5Q8N3R9 675 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 FBXO39Q8N4B4 442 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 LILRA3Q8N6C8 439 aaPredicted RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 CXorf40BQ96DE9 158 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 AHCYL2Q96HN2 611 aaKnown RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 SIGLEC10Q96LC7 697 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 SERPINB12Q96P63 405 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 TBC1D10AQ9BXI6 508 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 WWP1Q9H0M0 922 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 ASCL3Q9NQ33 180 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 OGFRQ9NZT2 677 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 MARCH4Q9P2E8 410 aaPredicted RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 PSMD13Q9UNM6 376 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 MYLKQ15746 1914 aa16.05■□□□□ 0.16
CHERP-206ENST00000597261 ANKRD11Q6UB99 2663 aaPredicted RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 COL27A1Q8IZC6 1860 aaPredicted RBP16.05■□□□□ 0.16
CHERP-206ENST00000597261 FAM237BA0A1B0GVD1 139 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 PMS2P1A4D2B8 440 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 PLD2O14939 933 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 HGSO14964 777 aaPredicted RBP16.04■□□□□ 0.16
CHERP-206ENST00000597261 POLBP06746 335 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 PBLDP30039 288 aaPredicted RBP16.04■□□□□ 0.16
CHERP-206ENST00000597261 CASQ1P31415 396 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 RPA4Q13156 261 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 CES3Q6UWW8 571 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 PCGF5Q86SE9 256 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 KLHL7Q8IXQ5 586 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 AGGF1Q8N302 714 aaeCLIP16.04■□□□□ 0.16
CHERP-206ENST00000597261 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
CHERP-206ENST00000597261 GPR150Q8NGU9 434 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 FCRL3Q96P31 734 aaPredicted RBP16.04■□□□□ 0.16
CHERP-206ENST00000597261 CMKLR1Q99788 373 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 OR52A5Q9H2C5 316 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 VPS37BQ9H9H4 285 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 EPB41L5Q9HCM4 733 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 CATSPERZQ9NTU4 200 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 TMEM9Q9P0T7 183 aa16.04■□□□□ 0.16
CHERP-206ENST00000597261 CDRT15L2A8MXV6 281 aa16.03■□□□□ 0.16
CHERP-206ENST00000597261 GOLGA8MH3BSY2 632 aa16.03■□□□□ 0.16
CHERP-206ENST00000597261 DNALI1O14645 258 aaPredicted RBP16.03■□□□□ 0.16
CHERP-206ENST00000597261 TLX3O43711 291 aaPredicted RBP16.03■□□□□ 0.16
CHERP-206ENST00000597261 DUX1O43812 170 aa16.03■□□□□ 0.16
CHERP-206ENST00000597261 VAPBO95292 243 aa16.03■□□□□ 0.16
CHERP-206ENST00000597261 THRAP10827 490 aa16.03■□□□□ 0.16
CHERP-206ENST00000597261 MTHFD1P11586 935 aaKnown RBP16.03■□□□□ 0.16
CHERP-206ENST00000597261 MPSTP25325 297 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms