RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 MYO1GB0I1T2 1018 aa15.07■□□□□ 0
UPF1-204ENST00000596842 NT5C1B-RDH14C9J2C7 533 aa15.07■□□□□ 0
UPF1-204ENST00000596842 H0Y626 953 aa15.07■□□□□ 0
UPF1-204ENST00000596842 TLR5O60602 858 aa15.07■□□□□ 0
UPF1-204ENST00000596842 TRIM16O95361 564 aa15.07■□□□□ 0
UPF1-204ENST00000596842 CTPS1P17812 591 aa15.07■□□□□ 0
UPF1-204ENST00000596842 TGFBIQ15582 683 aa15.07■□□□□ 0
UPF1-204ENST00000596842 TMEM199Q8N511 208 aa15.07■□□□□ 0
UPF1-204ENST00000596842 ASB2Q96Q27 587 aa15.07■□□□□ 0
UPF1-204ENST00000596842 ARNT2Q9HBZ2 717 aa15.07■□□□□ 0
UPF1-204ENST00000596842 ADGRE2Q9UHX3 823 aa15.07■□□□□ 0
UPF1-204ENST00000596842 CFAP99D6REC4 459 aa15.07■□□□□ 0
UPF1-204ENST00000596842 ZNF865P0CJ78 1059 aaPredicted RBP15.07■□□□□ 0
UPF1-204ENST00000596842 HOXD8P13378 290 aaPredicted RBP15.07■□□□□ 0
UPF1-204ENST00000596842 HSPA7P48741 367 aa15.07■□□□□ 0
UPF1-204ENST00000596842 IL2P60568 153 aa15.07■□□□□ 0
UPF1-204ENST00000596842 NFATC3Q12968 1075 aa15.07■□□□□ 0
UPF1-204ENST00000596842 MAP2K5Q13163 448 aa15.07■□□□□ 0
UPF1-204ENST00000596842 TUSC3Q13454 348 aa15.07■□□□□ 0
UPF1-204ENST00000596842 C8orf82Q6P1X6 216 aaPredicted RBP15.07■□□□□ 0
UPF1-204ENST00000596842 UMODL1-AS1Q8N2C9 162 aa15.07■□□□□ 0
UPF1-204ENST00000596842 KIAA1191Q96A73 305 aa15.07■□□□□ 0
UPF1-204ENST00000596842 COX4I2Q96KJ9 171 aa15.07■□□□□ 0
UPF1-204ENST00000596842 SACM1LQ9NTJ5 587 aa15.07■□□□□ 0
UPF1-204ENST00000596842 AIG1Q9NVV5 245 aa15.07■□□□□ 0
UPF1-204ENST00000596842 SNX5Q9Y5X3 404 aa15.07■□□□□ 0
UPF1-204ENST00000596842 MIA3Q5JRA6 1907 aa15.06■□□□□ 0
UPF1-204ENST00000596842 G3V2T6 193 aa15.06■□□□□ 0
UPF1-204ENST00000596842 ARVCFO00192 962 aa15.06■□□□□ 0
UPF1-204ENST00000596842 XPNPEP2O43895 674 aa15.06■□□□□ 0
UPF1-204ENST00000596842 CBFA2T3O75081 653 aa15.06■□□□□ 0
UPF1-204ENST00000596842 FGF1P05230 155 aa15.06■□□□□ 0
UPF1-204ENST00000596842 MYCLP1P12525 358 aaPredicted RBP15.06■□□□□ 0
UPF1-204ENST00000596842 ATP4BP51164 291 aa15.06■□□□□ 0
UPF1-204ENST00000596842 IL5RAQ01344 420 aa15.06■□□□□ 0
UPF1-204ENST00000596842 GTDC1Q4AE62 458 aa15.06■□□□□ 0
UPF1-204ENST00000596842 BROXQ5VW32 411 aa15.06■□□□□ 0
UPF1-204ENST00000596842 LETMD1Q6P1Q0 360 aa15.06■□□□□ 0
UPF1-204ENST00000596842 PRR23BQ6ZRT6 265 aa15.06■□□□□ 0
UPF1-204ENST00000596842 C8orf59Q8N0T1 100 aaPredicted RBP15.06■□□□□ 0
UPF1-204ENST00000596842 PACRGLQ8N7B6 248 aa15.06■□□□□ 0
UPF1-204ENST00000596842 PROKR1Q8TCW9 393 aa15.06■□□□□ 0
UPF1-204ENST00000596842 SNX19Q92543 992 aa15.06■□□□□ 0
UPF1-204ENST00000596842 ZFYVE19Q96K21 471 aa15.06■□□□□ 0
UPF1-204ENST00000596842 FAM193BQ96PV7 902 aaPredicted RBP15.06■□□□□ 0
UPF1-204ENST00000596842 TFB2MQ9H5Q4 396 aaKnown RBP15.06■□□□□ 0
UPF1-204ENST00000596842 INTS10Q9NVR2 710 aaKnown RBP15.06■□□□□ 0
UPF1-204ENST00000596842 DKK3Q9UBP4 350 aa15.06■□□□□ 0
UPF1-204ENST00000596842 INVSQ9Y283 1065 aa15.06■□□□□ 0
UPF1-204ENST00000596842 TLR6Q9Y2C9 796 aa15.06■□□□□ 0
UPF1-204ENST00000596842 SLC30A1Q9Y6M5 507 aa15.06■□□□□ 0
UPF1-204ENST00000596842 C2orf81A6NN90 581 aa15.06■□□□□ 0
UPF1-204ENST00000596842 FAM155AB1AL88 458 aaPredicted RBP15.06■□□□□ 0
UPF1-204ENST00000596842 TBC1D4O60343 1298 aa15.06■□□□□ 0
UPF1-204ENST00000596842 FGF4P08620 206 aa15.06■□□□□ 0
UPF1-204ENST00000596842 VAC14Q08AM6 782 aa15.06■□□□□ 0
UPF1-204ENST00000596842 RCAN2Q14206 197 aa15.06■□□□□ 0
UPF1-204ENST00000596842 CYP2A13Q16696 494 aa15.06■□□□□ 0
UPF1-204ENST00000596842 ZNF555Q8NEP9 628 aa15.06■□□□□ 0
UPF1-204ENST00000596842 LRRC3Q9BY71 257 aa15.06■□□□□ 0
UPF1-204ENST00000596842 FAIMQ9NVQ4 179 aa15.06■□□□□ 0
UPF1-204ENST00000596842 CARD8Q9Y2G2 431 aa15.06■□□□□ 0
UPF1-204ENST00000596842 PDCD11Q14690 1871 aaKnown RBP15.06■□□□□ 0
UPF1-204ENST00000596842 B4GALT3O60512 393 aa15.06■□□□□ 0
UPF1-204ENST00000596842 UROSP10746 265 aa15.06■□□□□ 0
UPF1-204ENST00000596842 ERVPABLB-1P60509 514 aa15.06■□□□□ 0
UPF1-204ENST00000596842 SIM2Q14190 667 aaPredicted RBP15.06■□□□□ 0
UPF1-204ENST00000596842 FAM174BQ3ZCQ3 159 aa15.06■□□□□ 0
UPF1-204ENST00000596842 CTXN3Q4LDR2 81 aa15.06■□□□□ 0
UPF1-204ENST00000596842 RFTN2Q52LD8 501 aaPredicted RBP15.06■□□□□ 0
UPF1-204ENST00000596842 ANKRD26P1Q6NSI1 321 aa15.06■□□□□ 0
UPF1-204ENST00000596842 OR2T12Q8NG77 320 aa15.06■□□□□ 0
UPF1-204ENST00000596842 KLQ9UEF7 1012 aa15.06■□□□□ 0
UPF1-204ENST00000596842 MICAL3Q7RTP6 2002 aa15.06■□□□□ 0
UPF1-204ENST00000596842 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
UPF1-204ENST00000596842 NOTOA8MTQ0 251 aa15.05■□□□□ 0
UPF1-204ENST00000596842 MFN2O95140 757 aa15.05■□□□□ 0
UPF1-204ENST00000596842 PAPSS2O95340 614 aaPredicted RBP15.05■□□□□ 0
UPF1-204ENST00000596842 PORP16435 677 aaPredicted RBP15.05■□□□□ 0
UPF1-204ENST00000596842 HLA-DPA1P20036 260 aa15.05■□□□□ 0
UPF1-204ENST00000596842 NKX2-5P52952 324 aaPredicted RBP15.05■□□□□ 0
UPF1-204ENST00000596842 CD300CQ08708 224 aa15.05■□□□□ 0
UPF1-204ENST00000596842 SPIDRQ14159 915 aa15.05■□□□□ 0
UPF1-204ENST00000596842 CLDN19Q8N6F1 224 aa15.05■□□□□ 0
UPF1-204ENST00000596842 ACDQ96AP0 544 aa15.05■□□□□ 0
UPF1-204ENST00000596842 SH3GL1Q99961 368 aa15.05■□□□□ 0
UPF1-204ENST00000596842 TMEM98Q9Y2Y6 226 aa15.05■□□□□ 0
UPF1-204ENST00000596842 BRCA1P38398 1863 aaKnown RBP15.05■□□□□ 0
UPF1-204ENST00000596842 TNFRSF10BO14763 440 aa15.05■□□□□ -0
UPF1-204ENST00000596842 DIRAS1O95057 198 aa15.05■□□□□ -0
UPF1-204ENST00000596842 ANXA6P08133 673 aa15.05■□□□□ -0
UPF1-204ENST00000596842 ERVK-8P63133 956 aa15.05■□□□□ -0
UPF1-204ENST00000596842 FPGSQ05932 587 aa15.05■□□□□ -0
UPF1-204ENST00000596842 TAF1CQ15572 869 aaPredicted RBP15.05■□□□□ -0
UPF1-204ENST00000596842 FAM110CQ1W6H9 321 aa15.05■□□□□ -0
UPF1-204ENST00000596842 CRTC3Q6UUV7 619 aa15.05■□□□□ -0
UPF1-204ENST00000596842 CYP20A1Q6UW02 462 aa15.05■□□□□ -0
UPF1-204ENST00000596842 BTLAQ7Z6A9 289 aa15.05■□□□□ -0
UPF1-204ENST00000596842 GALNT10Q86SR1 603 aa15.05■□□□□ -0
UPF1-204ENST00000596842 HID1Q8IV36 788 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms