RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 CASQ1P31415 396 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 INHBCP55103 352 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 LAMB3Q13751 1172 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 ITIH4Q14624 930 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 C16orf72Q14CZ0 275 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 PPP1R7Q15435 360 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 ST3GAL2Q16842 350 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 MSS51Q4VC12 460 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 CAPRIN2Q6IMN6 1127 aaKnown RBP10.92□□□□□ -0.66
VRK3-210ENST00000596121 DUS1LQ6P1R4 473 aaKnown RBP10.92□□□□□ -0.66
VRK3-210ENST00000596121 TMEM26Q6ZUK4 368 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 SLC9B2Q86UD5 537 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 JAMLQ86YT9 394 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 IGDCC3Q8IVU1 814 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 SPNS2Q8IVW8 549 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 PPIL6Q8IXY8 311 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 GRK7Q8WTQ7 553 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 HEXDCQ8WVB3 486 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 PEX13Q92968 403 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 KRT12Q99456 494 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 SLC38A3Q99624 504 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 TRIM51Q9BSJ1 452 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 CCM2Q9BSQ5 444 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 PLAC1Q9HBJ0 212 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 SLC40A1Q9NP59 571 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 IL1RAPL1Q9NZN1 696 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 DKK4Q9UBT3 224 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 URB1O60287 2271 aaKnown RBP10.92□□□□□ -0.66
VRK3-210ENST00000596121 ZFHX4Q86UP3 3567 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 KMT2BQ9UMN6 2715 aaPredicted RBP10.92□□□□□ -0.66
VRK3-210ENST00000596121 PKD1L2Q7Z442 2459 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 ZCWPW2A0A1B0GU75 182 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 IQCF5A8MTL0 148 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 CFAP99D6REC4 459 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 AP3B1O00203 1094 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 DNALI1O14645 258 aaPredicted RBP10.91□□□□□ -0.66
VRK3-210ENST00000596121 AP2A2O94973 939 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 VAPBO95292 243 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 VIPP01282 170 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 RALBP11234 206 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 VCLP18206 1134 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 CCKBRP32239 447 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 ETV5P41161 510 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 NSG1P42857 185 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 PREPP48147 710 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 LSSP48449 732 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 GABREP78334 506 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 PRAMEP78395 509 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 BIRC2Q13490 618 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 GPR18Q14330 331 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 ANKRD20A4Q4UJ75 823 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 FASTKD1Q53R41 847 aaKnown RBP10.91□□□□□ -0.66
VRK3-210ENST00000596121 C3orf38Q5JPI3 329 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 PACS1Q6VY07 963 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 PIM3Q86V86 326 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 PROSER1Q86XN7 944 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 UNC5BQ8IZJ1 945 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 RCBTB1Q8NDN9 531 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 HM13Q8TCT9 377 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 LIN37Q96GY3 246 aaPredicted RBP10.91□□□□□ -0.66
VRK3-210ENST00000596121 CCDC74BQ96LY2 380 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 OR52A5Q9H2C5 316 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 COG4Q9H9E3 785 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 POLR1BQ9H9Y6 1135 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 UCK1Q9HA47 277 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 EPB41L5Q9HCM4 733 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 XAB2Q9HCS7 855 aaKnown RBP10.91□□□□□ -0.66
VRK3-210ENST00000596121 ASCL3Q9NQ33 180 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 CATSPERZQ9NTU4 200 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 PDP2Q9P2J9 529 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 ASIC3Q9UHC3 531 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 RAXQ9Y2V3 346 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 AK5Q9Y6K8 562 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 PIKFYVEQ9Y2I7 2098 aa10.91□□□□□ -0.66
VRK3-210ENST00000596121 CCDC187A0A096LP49 1063 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 C17orf113A0A1B0GUU1 675 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 FAM237BA0A1B0GVD1 139 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 TMEM8BA6NDV4 472 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 LILRA5A6NI73 299 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 SDR42E2A6NKP2 422 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 SRRM3A6NNA2 597 aaPredicted RBP10.9□□□□□ -0.66
VRK3-210ENST00000596121 CCDC188H7C350 402 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 THRAP10827 490 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 MTHFD1P11586 935 aaKnown RBP10.9□□□□□ -0.66
VRK3-210ENST00000596121 CCL4P13236 92 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 SLC2A4P14672 509 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 TYRP1P17643 537 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 ITGB6P18564 788 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 MAPK9P45984 424 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 LIMK2P53671 638 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 PPP1CAP62136 330 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 GPLD1P80108 840 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 SARNPP82979 210 aaKnown RBP10.9□□□□□ -0.66
VRK3-210ENST00000596121 DR1Q01658 176 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 C2orf54Q08AI8 447 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 MAP9Q49MG5 647 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 ZNF789Q5FWF6 425 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 PHF19Q5T6S3 580 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 IZUMO3Q5VZ72 239 aa10.9□□□□□ -0.66
VRK3-210ENST00000596121 TMEM71Q6P5X7 295 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms